Protein Concepts Dictionary

Tableau information

Concept source:  d1gcia_  amino acid (a.a.) range (TYR171)(ARG275)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEEEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (TYR171)  (MET175) H1
	  (MET175)  (ALA179) E2
	  (ASP197)  (PRO201) E3
	  (ASN204)  (THR208) E4
	  (ALA215)  (GLY219) E5
	  (GLY219)  (LYS237) H6
	  (SER242)  (ALA254) H7
	  (ASN269)  (ARG275) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2       68.5°   E2                                               
E3       49.6°  -35.1°   E3                                        
E4       80.1° -120.5°   86.3°   E4                                 
E5     -134.2° -113.0° -148.0°  124.9°   E5                          
H6       63.2°  130.5°  109.2°   61.1°  -93.9°   H6                   
H7       66.8°   33.9°   61.6°  143.9°  -89.7°  112.0°   H7            
H8      -81.6°  147.0° -127.5°  -64.6°   78.2°  -18.6°  121.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ndua_ :   (TYR171)  (ARG275)   [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Subtilisin |Bacillus lentus [TaxId: 1467]
 d1wsda_ :   (TYR171)  (ARG275)   [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |M-proteinase |Bacillus sp., strain ksm-k16 [TaxId: 1409]
 d1st3a_ :   (TYR165)  (GLY258)   [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Subtilisin |Bacillus lentus [TaxId: 1467]
 d1y4de_ :   (TYR171)  (HIS276)   [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Subtilisin |Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]
 d1gcia_ :   (TYR171)  (ARG275)   [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Subtilisin |Bacillus lentus [TaxId: 1467]
 d1c9ja_ :   (TYR171)  (ARG275)   [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Subtilisin |Bacillus lentus [TaxId: 1467]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.41