Protein Concepts Dictionary

Tableau information

Concept source:  d1mx0e2  amino acid (a.a.) range (GLU319)(GLU461)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEEEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU319)  (ASN331) H1
	  (ASP333)  (THR339) E2
	  (LYS341)  (GLN346) E3
	  (PRO349)  (PHE358) E4
	  (ILE369)  (ASN375) E5
	  (VAL387)  (GLU394) H6
	  (GLN408)  (SER417) E7
	  (GLU434)  (GLU461) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2      152.7°   E2                                               
E3       98.6°  -55.1°   E3                                        
E4      -32.8°  173.0°  128.2°   E4                                 
E5      143.9°  -26.8°  -68.2°  156.8°   E5                          
H6      -76.1°  122.6°  123.1°  -50.6°  139.7°   H6                   
E7      145.7°  -15.8°  -57.9°  169.1°  -12.5°  136.6°   E7            
H8      -58.6°  148.8° -153.5°  -26.4°  138.1°  -43.3°  148.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1mx0c2 :   (GLU319)  (LEU469)   [view usage] : d.14.1.3 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |DNA gyrase/MutL, second domain |Topoisomerase VI-B subunit |Sulfolobus shibatae [TaxId: 2286]
 d1mx0a2 :   (GLY318)  (LYS466)   [view usage] : d.14.1.3 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |DNA gyrase/MutL, second domain |Topoisomerase VI-B subunit |Sulfolobus shibatae [TaxId: 2286]
 d1z59a2 :   (LEU321)  (LYS458)   [view usage] : d.14.1.3 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |DNA gyrase/MutL, second domain |Topoisomerase VI-B subunit |Sulfolobus shibatae [TaxId: 2286]
 d1z5ab2 :   (GLY318)  (GLU463)   [view usage] : d.14.1.3 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |DNA gyrase/MutL, second domain |Topoisomerase VI-B subunit |Sulfolobus shibatae [TaxId: 2286]
 d1z5aa2 :   (GLU319)  (LEU469)   [view usage] : d.14.1.3 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |DNA gyrase/MutL, second domain |Topoisomerase VI-B subunit |Sulfolobus shibatae [TaxId: 2286]
 d1mu5a2 :   (GLY318)  (LEU469)   [view usage] : d.14.1.3 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |DNA gyrase/MutL, second domain |Topoisomerase VI-B subunit |Sulfolobus shibatae [TaxId: 2286]
 d1mx0b2 :   (GLY318)  (LYS458)   [view usage] : d.14.1.3 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |DNA gyrase/MutL, second domain |Topoisomerase VI-B subunit |Sulfolobus shibatae [TaxId: 2286]
 d1mx0e2 :   (GLU319)  (GLU461)   [view usage] : d.14.1.3 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |DNA gyrase/MutL, second domain |Topoisomerase VI-B subunit |Sulfolobus shibatae [TaxId: 2286]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.14