Protein Concepts Dictionary

Tableau information

Concept source:  d1vyba_  amino acid (a.a.) range (THR47)(MET143)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HEEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR47)   (LYS55) H1
	   (LYS61)   (GLY67) E2
	   (ALA72)   (LYS81) E3
	   (THR87)   (ASP92) E4
	   (HIS96)  (GLY102) E5
	  (GLU108)  (ILE114) E6
	  (ALA121)  (LEU132) H7
	  (HIS139)  (MET143) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
E2      154.0°   E2                                               
E3      -28.1°  177.7°   E3                                        
E4      130.3°  -24.0° -157.7°   E4                                 
E5      -54.0°  151.2°  -27.2°  174.5°   E5                          
E6      120.9°  -34.6°  146.8°  -11.9°  173.6°   E6                   
H7      -83.1°  122.8°  -55.1°  145.2°  -32.2°  149.7°   H7            
E8      101.0°  -55.1°  126.3°  -32.0°  153.4°  -20.5°  154.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4f1ra_ :    (SER39)  (GLY147)   [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d2v0ra_ :    (THR51)  (MET143)   [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4awna_ :    (LEU45)  (ASP168)   [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1dewb_ :   (PRO105)  (GLY209)   [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |DNA repair endonuclease Hap1 |Human (Homo sapiens) [TaxId: 9606]
 d1vybb_ :    (THR47)  (MET143)   [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |Endonuclease domain of LINE-1 reverse transcriptase homolog |Human (Homo sapiens) [TaxId: 9606]
 d1ntfa_ :    (GLN56)  (ILE169)   [view usage] : d.151.1.2 |DNase I-like |DNase I-like |Inositol polyphosphate 5-phosphatase (IPP5) |Salivary nitrophorin |Bedbug (Cimex lectularius) [TaxId: 79782]
 d1bixa_ :   (PRO105)  (GLY209)   [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |DNA repair endonuclease Hap1 |Human (Homo sapiens) [TaxId: 9606]
 d1vyba_ :    (THR47)  (MET143)   [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |Endonuclease domain of LINE-1 reverse transcriptase homolog |Human (Homo sapiens) [TaxId: 9606]
 d2v0rb_ :    (THR51)  (MET143)   [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1dewa_ :   (PRO105)  (CYS208)   [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |DNA repair endonuclease Hap1 |Human (Homo sapiens) [TaxId: 9606]
 d4l1za_ :    (GLN56)  (GLY170)   [view usage] : d.151.1.2 |DNase I-like |DNase I-like |Inositol polyphosphate 5-phosphatase (IPP5) |automated matches |Bedbug (Cimex lectularius) [TaxId: 79782]
 d1de8a_ :   (LEU111)  (GLY209)   [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |DNA repair endonuclease Hap1 |Human (Homo sapiens) [TaxId: 9606]
 d4qh9a_ :   (PRO105)  (GLY209)   [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |DNA repair endonuclease Hap1 |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.151