Tableau information
Concept source: d1jria_ amino acid (a.a.) range (ARG13)(GLY73)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: HEEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG13) (LEU22) H1
(VAL26) (LYS31) E2
(ARG34) (GLY38) E3
(LYS41) (LEU45) E4
(LEU49) (ASP53) E5
(ASP53) (GLU58) E6
(THR63) (GLY67) E7
(GLY67) (GLY73) E8
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -131.1° E2
E3 -54.2° 165.0° E3
E4 -172.9° 49.5° -123.1° E4
E5 19.7° -119.5° 69.7° -166.1° E5
E6 116.4° -37.3° 157.6° -68.6° 97.6° E6
E7 -79.6° 128.2° -36.9° 95.0° -98.9° 163.1° E7
E8 176.0° 50.4° -125.5° -10.9° 157.6° 62.3° -102.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1jrie_ : (ASP16) (GLY73) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d4m78k_ : (VAL11) (ARG74) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4c92c_ : (THR3) (GLY70) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1jbmg_ : (ASP16) (GLY73) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1lojc_ : (PRO14) (GLY73) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1lnxa_ : (THR11) (ARG69) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Pyrobaculum aerophilum [TaxId: 13773]
d1lojb_ : (PRO14) (GLY73) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1jrij_ : (ARG13) (ARG72) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d4m77d_ : (SER10) (ARG74) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3swne_ : (SER3) (ARG63) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Schizosaccharomyces pombe [TaxId: 284812]
d4c92f_ : (SER10) (ARG74) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1jbma_ : (ASP16) (ARG72) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1jbme_ : (ASP16) (GLY73) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d3swnq_ : (SER4) (ARG63) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Schizosaccharomyces pombe [TaxId: 284812]
d4m75d_ : (GLU14) (ARG74) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3swnb_ : (SER4) (ARG63) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Schizosaccharomyces pombe [TaxId: 284812]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.38