Tableau information
Concept source: d4f7ua_ amino acid (a.a.) range (VAL1004)(PRO1071)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: HEEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL1004) (LEU1010) H1
(VAL1015) (LEU1019) E2
(THR1023) (GLY1027) E3
(MET1036) (ALA1042) E4
(ALA1042) (LYS1048) E5
(GLU1051) (GLU1056) E6
(GLU1056) (ARG1061) E7
(ARG1066) (PRO1071) E8
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -129.7° E2
E3 50.9° 159.1° E3
E4 17.5° -123.3° 63.5° E4
E5 129.4° -32.1° 168.5° -114.3° E5
E6 -71.9° 123.1° -36.4° -88.9° 152.8° E6
E7 -172.1° 50.8° -125.2° 170.0° 56.1° 101.1° E7
E8 48.6° 165.8° -34.6° 49.8° 134.7° -70.9° -133.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1d3ba_ : (PRO6) (PRO74) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |D3 core SNRNP protein |Human (Homo sapiens) [TaxId: 9606]
d1d3bg_ : (VAL5) (PRO74) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |D3 core SNRNP protein |Human (Homo sapiens) [TaxId: 9606]
d4f7ua_ : (VAL1004) (PRO1071) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |D1 core SNRNP protein |Mouse (Mus musculus) [TaxId: 10090]
d1d3be_ : (PRO6) (PRO74) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |D3 core SNRNP protein |Human (Homo sapiens) [TaxId: 9606]
d1b34a_ : (LEU3) (PRO71) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |D1 core SNRNP protein |Human (Homo sapiens) [TaxId: 9606]
d4emka_ : (LEU6) (PRO75) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Schizosaccharomyces pombe [TaxId: 284812]
d1vu2a_ : (LEU1001) (PRO1069) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |D1 core SNRNP protein |Human (Homo sapiens) [TaxId: 9606]
d1d3bc_ : (PRO6) (PRO74) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |D3 core SNRNP protein |Human (Homo sapiens) [TaxId: 9606]
d3s6na_ : (VAL4) (PRO71) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |D1 core SNRNP protein |Human (Homo sapiens) [TaxId: 9606]
d4f7uc_ : (LEU1003) (PRO1071) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |D1 core SNRNP protein |Mouse (Mus musculus) [TaxId: 10090]
d1vu2d_ : (PRO4001) (GLY4068) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3swns_ : (LEU6) (PRO75) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Schizosaccharomyces pombe [TaxId: 284812]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.38