Protein Concepts Dictionary

Tableau information

Concept source:  d1m1oa1  amino acid (a.a.) range (ALA8)(GLY106)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EHHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ALA8)   (THR13) E1
	   (SER17)   (ALA23) H2
	   (ALA27)   (GLY43) H3
	   (ASN50)   (GLN56) E4
	   (GLN56)   (GLU62) H5
	   (PRO66)   (GLY75) H6
	   (GLU79)   (GLN87) E7
	   (SER91)  (GLY106) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
H2      100.5°   H2                                               
H3      145.1°   70.8°   H3                                        
E4      -39.5° -140.0°  137.4°   E4                                 
H5       56.8°  -53.9° -124.7°   91.9°   H5                          
H6      104.0°   37.2°  -48.6°  131.3°   82.4°   H6                   
E7      -63.8° -164.0°  119.6°  -24.4° -114.3°  139.4°   E7            
H8      155.1°   59.8°  -47.6°  157.5°  -98.4°  -70.3°  136.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1m1ta1 :     (ALA8)  (GLY106)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Biosynthetic thiolase |Zoogloea ramigera [TaxId: 350]
 d2vtza1 :     (SER4)  (GLY106)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Biosynthetic thiolase |Zoogloea ramigera [TaxId: 350]
 d1m1oa1 :     (ALA8)  (GLY106)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Biosynthetic thiolase |Zoogloea ramigera [TaxId: 350]
 d1dlua1 :     (SER9)  (GLY106)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Biosynthetic thiolase |Zoogloea ramigera [TaxId: 350]
 d1m3ka1 :     (ALA8)  (GLY106)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Biosynthetic thiolase |Zoogloea ramigera [TaxId: 350]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.95