Protein Concepts Dictionary

Tableau information

Concept source:  d3eznb_  amino acid (a.a.) range (HIS0)(ARG114)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EHHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (HIS0)    (ARG8) E1
	   (SER12)   (ASN18) H2
	   (THR29)   (GLY47) H3
	   (ASP51)   (SER56) E4
	   (LEU58)   (MET72) H5
	   (VAL77)   (TRP83) E6
	   (LYS98)  (LYS104) H7
	  (GLU108)  (ARG114) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
H2      -56.6°   H2                                               
H3      160.7°  121.6°   H3                                        
E4      -40.4°   50.2°  156.3°   E4                                 
H5      121.9° -117.1°  -39.5°  160.5°   H5                          
E6      -60.0°   53.4°  136.9°  -19.6°  168.8°   E6                   
H7       77.2°  -46.0°  116.2°   40.4° -145.6°   24.2°   H7            
H8      140.4° -162.9°  -42.7°  139.8°  -57.1°  129.8°  128.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4ij5a_ :     (LYS3)  (GLU110)   [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Hydrogenobacter thermophilus [TaxId: 608538]
 d1bq3b_ :     (PRO1)  (ARG113)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Phosphoglycerate mutase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3lnta_ :     (SER0)  (ARG114)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Burkholderia pseudomallei [TaxId: 320372]
 d1fzta_ :     (ASN8)  (ARG120)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Phosphoglycerate mutase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d4odid_ :    (TYR19)  (SER133)   [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Toxoplasma gondii [TaxId: 508771]
 d3eznb_ :     (HIS0)  (ARG114)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Burkholderia pseudomallei [TaxId: 320372]
 d4ij6a_ :     (LYS3)  (GLU110)   [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Hydrogenobacter thermophilus [TaxId: 608538]
 d3gp3a_ :     (TYR2)  (ARG114)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Burkholderia pseudomallei [TaxId: 28450]
 d4gpic_ :     (TYR4)  (TRP115)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1yfkb_ :     (TYR4)  (SER118)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4odic_ :    (TYR19)  (SER133)   [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Toxoplasma gondii [TaxId: 508771]
 d4odib_ :    (TYR19)  (ARG131)   [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Toxoplasma gondii [TaxId: 508771]
 d1yfka_ :     (TYR4)  (SER118)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1e59a_ :     (THR3)  (ARG115)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Phosphoglycerate mutase |Escherichia coli [TaxId: 562]
 d1ebba_ :     (ALA2)  (TRP109)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Broad specificity phosphatase PhoE (YhfR) |Bacillus stearothermophilus [TaxId: 1422]
 d3kkka_ :     (TYR4)  (SER118)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Plasmodium falciparum [TaxId: 36329]
 d1riic_ :     (SER6)  (ARG118)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Phosphoglycerate mutase |Mycobacterium tuberculosis [TaxId: 1773]
 d3fdza_ :     (TYR2)  (ARG114)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Burkholderia pseudomallei [TaxId: 320372]
 d1h2ea_ :     (THR4)  (PHE108)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Broad specificity phosphatase PhoE (YhfR) |Bacillus stearothermophilus [TaxId: 1422]
 d1qhfa_ :     (PRO1)  (ARG113)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Phosphoglycerate mutase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4odia_ :    (TYR19)  (ARG131)   [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Toxoplasma gondii [TaxId: 508771]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.60