Protein Concepts Dictionary

Tableau information

Concept source:  d1kzb1_  amino acid (a.a.) range (TYR111)(SER220)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EHHEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (TYR111)  (ARG117) E1
	  (LEU121)  (GLN132) H2
	  (ASN140)  (ALA151) H3
	  (ASP153)  (GLY158) E4
	  (ASN182)  (ASN188) H5
	  (CYS195)  (THR200) E6
	  (LYS203)  (ASP206) E7
	  (LEU214)  (SER220) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
H2      133.8°   H2                                               
H3      -36.1°  100.8°   H3                                        
E4      120.4°  -72.5°  133.8°   E4                                 
H5       70.0°  -98.1°   85.7°  -51.8°   H5                          
E6      -95.8°   81.9°  -75.3°  143.7°  160.6°   E6                   
E7       73.5°  -99.6°   91.5°  -47.4°   -6.4°  166.7°   E7            
E8      155.2°  -29.8°  129.5°  -48.9°  -91.5°   97.5°  -89.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1kza2_ :   (LYS114)  (SER225)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Mannose-binding protein A, C-lectin domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1msba_ :   (LYS110)  (PRO220)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Mannose-binding protein A, C-lectin domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3g84a1 :   (GLU242)  (PHE355)   [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1hupa1 :   (ASN116)  (PRO227)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Mannose-binding protein A, C-lectin domain |Human (Homo sapiens) [TaxId: 9606]
 d1afa11 :   (PHE111)  (PRO225)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Mannose-binding protein A, C-lectin domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1yttb_ :   (LYS110)  (PHE219)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Mannose-binding protein A, C-lectin domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1bcj11 :   (PHE111)  (PRO225)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Mannose-binding protein A, C-lectin domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1fifa1 :   (LYS109)  (PRO225)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Mannose-binding protein A, C-lectin domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4m17a_ :   (GLU242)  (PHE355)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4m17c1 :   (GLU242)  (PHE355)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4m17k_ :   (GLU242)  (PHE355)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1kwza1 :   (PHE111)  (PRO220)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Mannose-binding protein A, C-lectin domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4m17b_ :   (GLU242)  (PHE355)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1kza1_ :   (LYS114)  (SER225)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Mannose-binding protein A, C-lectin domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2msba_ :   (LYS110)  (PRO220)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Mannose-binding protein A, C-lectin domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4m17l_ :   (LYS243)  (PHE355)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1kzb1_ :   (TYR111)  (SER220)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Mannose-binding protein A, C-lectin domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4dn8a1 :   (GLU242)  (PHE355)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Surfactant protein, lectin domain |Pig (Sus scrofa) [TaxId: 9823]
 d2msbb_ :   (LYS109)  (PRO220)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Mannose-binding protein A, C-lectin domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1bch11 :   (PHE111)  (PRO225)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Mannose-binding protein A, C-lectin domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1b08a1 :   (GLU242)  (PHE355)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Surfactant protein, lectin domain |Human (Homo sapiens), SP-D [TaxId: 9606]
 d1kmb11 :   (LYS109)  (PRO220)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Mannose-binding protein A, C-lectin domain |Norway rat (Rattus norvegicus) [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.169