Protein Concepts Dictionary

Tableau information

Concept source:  d1hjoa2  amino acid (a.a.) range (LYS220)(LYS325)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EHHEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LYS220)  (ASP225) E1
	  (GLY230)  (LYS248) H2
	  (ASN256)  (LEU274) H3
	  (THR278)  (ASP285) E4
	  (GLY290)  (ARG299) E5
	  (ARG299)  (CYS306) H6
	  (CYS306)  (SER312) H7
	  (LEU314)  (LYS325) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
H2       17.0°   H2                                               
H3      132.6°  116.6°   H3                                        
E4      -46.3°  -62.9°  154.5°   E4                                 
E5      139.1°  122.9°  -29.0°  173.2°   E5                          
H6      103.0°  111.3° -115.0°   86.4°  -87.9°   H6                   
H7      164.3°  170.3°  -62.8°  122.4°  -51.4°  -62.8°   H7            
H8      156.2°  159.1°  -67.4°  123.2°  -50.1°  -53.2°   11.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3l6qb2 :   (ILE232)  (GLY342)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Cryptosporidium parvum [TaxId: 353152]
 d3fe1c2 :   (VAL218)  (LYS327)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1hjoa2 :   (LYS220)  (LYS325)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Human (Homo sapiens) [TaxId: 9606]
 d3gdqa2 :   (LYS222)  (LYS327)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2qwqa2 :   (LYS220)  (LYS325)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d3iucc2 :   (VAL245)  (ASP350)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55