Protein Concepts Dictionary

Tableau information

Concept source:  d2i6bb_  amino acid (a.a.) range (ASP218)(SER328)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EHHEEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP218)  (GLY222) E1
	  (THR225)  (GLU233) H2
	  (ASP240)  (LEU251) H3
	  (GLN259)  (THR265) E4
	  (THR271)  (THR275) E5
	  (GLU278)  (VAL284) E6
	  (ASP294)  (ASP313) H7
	  (LEU316)  (SER328) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
H2      113.5°   H2                                               
H3      149.8°   56.2°   H3                                        
E4      -15.2° -127.7°  148.5°   E4                                 
E5      157.5°   47.0°  -36.8°  172.3°   E5                          
E6      -47.1° -151.7°  127.1°  -32.1°  155.4°   E6                   
H7      160.4°  -82.9°  -48.2°  149.1°  -36.0°  121.1°   H7            
H8      -36.7°  123.1°  120.5°  -28.1°  156.7°  -28.6°  142.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4en4a_ :   (ASP145)  (GLN277)   [view usage] : c.72.1.5 |Ribokinase-like |Ribokinase-like |PfkB-like kinase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2v78a_ :   (GLU190)  (THR290)   [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |automated matches |Sulfolobus solfataricus [TaxId: 2287]
 d2i6ba_ :   (ASP218)  (ALA327)   [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Adenosine kinase |Human (Homo sapiens) [TaxId: 9606]
 d2f7ka_ :   (ILE146)  (GLN277)   [view usage] : c.72.1.5 |Ribokinase-like |Ribokinase-like |PfkB-like kinase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2rbca_ :   (THR183)  (THR286)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
 d3pl2d_ :   (THR196)  (ARG297)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Corynebacterium glutamicum [TaxId: 1718]
 d3fhxb_ :   (ASP145)  (GLN277)   [view usage] : c.72.1.5 |Ribokinase-like |Ribokinase-like |PfkB-like kinase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2i6bb_ :   (ASP218)  (SER328)   [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Adenosine kinase |Human (Homo sapiens) [TaxId: 9606]
 d3kd6a_ :   (ASP168)  (GLU274)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Chlorobaculum tepidum [TaxId: 1097]
 d2dcna1 :   (LYS189)  (VAL287)   [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Hypothetical fructokinase ST2478 |Sulfolobus tokodaii [TaxId: 111955]
 d3in1a_ :   (ASP191)  (LEU292)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1yhja_ :   (ASP145)  (SER278)   [view usage] : c.72.1.5 |Ribokinase-like |Ribokinase-like |PfkB-like kinase |Pyridoxal kinase |Sheep (Ovis aries) [TaxId: 9940]
 d3h49a_ :   (ASP191)  (LEU292)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3pl2a_ :   (THR196)  (ARG297)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Corynebacterium glutamicum [TaxId: 1718]
 d1rfua_ :   (ASP145)  (SER278)   [view usage] : c.72.1.5 |Ribokinase-like |Ribokinase-like |PfkB-like kinase |Pyridoxal kinase |Sheep (Ovis aries) [TaxId: 9940]
 d1td2a_ :   (ASP141)  (GLN262)   [view usage] : c.72.1.5 |Ribokinase-like |Ribokinase-like |PfkB-like kinase |Pyridoxamine kinase |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.72