Protein Concepts Dictionary

Tableau information

Concept source:  d4unya_  amino acid (a.a.) range (ARG57)(GLY124)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EHHEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG57)   (ASN63) E1
	   (THR65)   (LEU71) H2
	   (ASP73)   (GLN80) H3
	   (TYR81)   (ASP85) E4
	   (ASP85)   (ARG90) E5
	   (PRO99)  (PRO103) E6
	  (TYR105)  (GLY116) H7
	  (GLU119)  (GLY124) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
H2       88.3°   H2                                               
H3      166.3°  -81.6°   H3                                        
E4     -118.1° -152.8°   73.3°   E4                                 
E5      -25.2°  110.1°  155.4°   97.1°   E5                          
E6     -127.6°  108.0°   65.0°  -51.6° -126.8°   E6                   
H7      143.2°   77.3°   24.7°  -84.1°  134.4°   89.2°   H7            
E8       64.6°  -34.6° -109.8°  150.3°  -89.8°  101.7°  111.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4uo4a_ :    (ARG57)  (GLY124)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza A virus [TaxId: 11320]
 d4uo3c_ :    (ARG57)  (GLY124)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus [TaxId: 560387]
 d4unwc_ :    (ARG57)  (GLY124)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/eq/newmarket/93/(h3n8)) [TaxId: 159470]
 d1kena_ :    (ARG57)  (GLY129)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d1eo8a_ :    (ARG57)  (GLY124)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d1ha0a1 :    (ARG57)  (GLY124)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d1mqla_ :    (ARG57)  (THR122)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d1hgda_ :    (ARG57)  (GLY124)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d3eyja_ :    (LYS57)  (GLN124)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza A virus [TaxId: 11320]
 d4uoaa_ :    (ARG57)  (GLY124)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/canine/colorado/17864/2006(h3n8)) [TaxId: 867285]
 d4unya_ :    (ARG57)  (GLY124)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/canine/colorado/17864/2006(h3n8)) [TaxId: 867285]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.19