Protein Concepts Dictionary

Tableau information

Concept source:  d1fo4a5  amino acid (a.a.) range (VAL857)(SER1008)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EHEHHHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (VAL857)  (ASN866) E1
	  (SER874)  (HIS884) H2
	  (ILE894)  (ASN904) E3
	  (GLY915)  (GLY935) H4
	  (PRO937)  (MET946) H5
	  (SER963)  (GLN976) H6
	  (ARG980)  (GLU990) H7
	  (LYS995) (SER1008) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
H2      161.2°   H2                                               
E3      -10.2°  156.0°   E3                                        
H4      140.2°  -30.7°  130.6°   H4                                 
H5      -98.1°   98.9° -105.1°  117.8°   H5                          
H6       86.6°  -74.8°   82.2°  -64.8° -162.0°   H6                   
H7       70.4°  -99.2°   60.4°  -70.3°  145.5°   52.4°   H7            
E8      -80.2°  115.9°  -87.9°  136.2°   18.5°  154.4° -139.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1dgja4 :   (LEU480)  (GLY625)   [view usage] : d.133.1.1 |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Aldehyde oxidoreductase |Desulfovibrio desulfuricans [TaxId: 876]
 d1fo4a5 :   (VAL857) (SER1008)   [view usage] : d.133.1.1 |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Xanthine oxidase, C-terminal domain |Cow (Bos taurus) [TaxId: 9913]
 d1fiqc2 :   (VAL857) (SER1008)   [view usage] : d.133.1.1 |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Xanthine oxidase, C-terminal domain |Cow (Bos taurus) [TaxId: 9913]
 d3ax7a4 :   (VAL857) (SER1008)   [view usage] : d.133.1.1 |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Xanthine oxidase, C-terminal domain |Cow (Bos taurus) [TaxId: 9913]
 d3eubc2 :   (VAL857) (SER1008)   [view usage] : d.133.1.1 |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d1zxib2 :   (LEU329)  (VAL490)   [view usage] : d.133.1.1 |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |automated matches |Oligotropha carboxidovorans [TaxId: 504832]
 d1n5wb2 :   (LEU329)  (VAL490)   [view usage] : d.133.1.1 |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Carbon monoxide (CO) dehydrogenase molybdoprotein |Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.133