Protein Concepts Dictionary

Tableau information

Concept source:  d3wwob_  amino acid (a.a.) range (HIS5)(LYS92)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EHEHHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (HIS5)   (THR11) E1
	   (GLY15)   (GLY30) H2
	   (HIS31)   (ASP37) E3
	   (GLN47)   (GLY52) H4
	   (THR53)   (GLU59) H5
	   (GLU59)   (SER67) H6
	   (GLY71)   (SER80) E7
	   (SER80)   (LYS92) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
H2      159.0°   H2                                               
E3      -30.2° -170.7°   E3                                        
H4     -100.7°   83.4°   96.0°   H4                                 
H5      129.0°  -51.0°  125.7°  130.3°   H5                          
H6     -174.1°  -24.2°  147.1°   73.6°  -56.6°   H6                   
E7      -25.3°  135.1°  -53.4° -114.7°  112.1°  159.2°   E7            
H8      130.3°  -66.0°  107.2°   43.8°  -93.6°  -44.2° -153.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1xkla_ :     (LYS5)   (LYS93)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Salicylic acid-binding protein 2 (SABP2) |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d3wwpg_ :     (HIS5)   (LYS92)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Baliospermum montanum [TaxId: 316758]
 d3wwpa_ :    (GLY-1)   (LYS92)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Baliospermum montanum [TaxId: 316758]
 d1xklc_ :     (GLU3)   (LYS93)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Salicylic acid-binding protein 2 (SABP2) |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d1pjaa_ :    (VAL39)  (VAL123)   [view usage] : c.69.1.13 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Thioesterases |Palmitoyl protein thioesterase 2 |Human (Homo sapiens) [TaxId: 9606]
 d3wwpl_ :    (GLY-1)   (LYS92)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Baliospermum montanum [TaxId: 316758]
 d3wwob_ :     (HIS5)   (LYS92)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Baliospermum montanum [TaxId: 316758]
 d3wwpr_ :    (GLY-1)   (LYS92)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Baliospermum montanum [TaxId: 316758]
 d3wwpb_ :     (HIS5)   (LYS92)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Baliospermum montanum [TaxId: 316758]
 d3wwoa_ :     (HIS5)   (LYS92)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Baliospermum montanum [TaxId: 316758]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.69