Protein Concepts Dictionary

Tableau information

Concept source:  d1d4aa_  amino acid (a.a.) range (ARG3)(TYR126)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EHEHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ARG3)    (LEU9) E1
	   (PHE17)   (GLY33) H2
	   (GLU35)   (LEU41) E3
	   (GLN66)   (GLU77) H4
	   (PRO82)   (ALA94) H5
	   (ASP95)  (PHE101) E6
	  (ALA110)  (PHE120) H7
	  (ILE121)  (TYR126) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
H2     -173.6°   H2                                               
E3      -16.6°  163.6°   E3                                        
H4      143.9°  -29.7°  145.0°   H4                                 
H5     -135.9°   48.5° -143.9°  -70.7°   H5                          
E6      -18.2°  161.3°  -34.3°  140.9°  120.1°   E6                   
H7      131.4°  -48.8°  115.2°  -58.8°  -85.9° -149.5°   H7            
H8     -131.8°   52.6° -140.2°  -74.2°    4.1° -116.1°   89.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1qrda_ :     (ARG3)  (TYR126)   [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |NAD(P)H:quinone reductase |Rat (Rattus rattus) [TaxId: 10117]
 d3tzba_ :     (LYS3)  (PHE126)   [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |Quinone reductase type 2 (menadione reductase) |Human (Homo sapiens) [TaxId: 9606]
 d1kbqb_ :     (ARG3)  (TYR126)   [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |NAD(P)H:quinone reductase |Human (Homo sapiens) [TaxId: 9606]
 d1qr2a_ :     (LYS3)  (PHE126)   [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |Quinone reductase type 2 (menadione reductase) |Human (Homo sapiens) [TaxId: 9606]
 d1zx1b_ :     (LYS3)  (PHE126)   [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |Quinone reductase type 2 (menadione reductase) |Human (Homo sapiens) [TaxId: 9606]
 d1kbqa_ :     (ARG3)  (TYR126)   [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |NAD(P)H:quinone reductase |Human (Homo sapiens) [TaxId: 9606]
 d1dxqa_ :     (ARG3)  (TYR126)   [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |NAD(P)H:quinone reductase |Mouse (Mus musculus) [TaxId: 10090]
 d1d4aa_ :     (ARG3)  (TYR126)   [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |NAD(P)H:quinone reductase |Human (Homo sapiens) [TaxId: 9606]
 d1qbga_ :     (ARG4)  (TYR126)   [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |NAD(P)H:quinone reductase |Human (Homo sapiens) [TaxId: 9606]
 d3ovma_ :     (LYS3)  (PHE126)   [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |Quinone reductase type 2 (menadione reductase) |Human (Homo sapiens) [TaxId: 9606]
 d1h66a_ :     (ARG3)  (TYR126)   [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |NAD(P)H:quinone reductase |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.23