Protein Concepts Dictionary

Tableau information

Concept source:  d4o33a_  amino acid (a.a.) range (LYS16)(ASN120)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EHEHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS16)   (PRO27) E1
	   (GLN37)   (GLY53) H2
	   (SER56)   (HIS62) E3
	   (MET71)   (SER76) H4
	   (LEU77)   (LEU88) H5
	   (LYS90)   (LYS96) E6
	  (PRO101)  (CYS107) H7
	  (SER114)  (ASN120) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
H2     -168.7°   H2                                               
E3      -31.5°  159.8°   E3                                        
H4       89.8°  -84.5°  107.8°   H4                                 
H5      113.9°  -57.8°  137.5°  -30.3°   H5                          
E6      -77.9°  110.8°  -52.4°  155.4°  167.9°   E6                   
H7      118.5°  -53.2°  141.7°  -34.1°   -4.6°  163.4°   H7            
E8      -46.6°  143.8°  -17.7°  124.3°  154.5°  -34.7° -158.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4o33a_ :    (LYS16)  (ASN120)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2xe6a_ :    (ARG17)  (ASN120)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ybea_ :    (ARG17)  (ASN120)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2p9ta_ :    (ARG17)  (GLU119)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2y3ia_ :    (LYS16)  (LEU117)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1kf0a_ :    (LYS16)  (ASN120)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Pig (Sus scrofa) [TaxId: 9823]
 d1hdia_ :    (ARG17)  (ASN120)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Pig (Sus scrofa) [TaxId: 9823]
 d1vjca_ :    (ARG17)  (ASN120)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Pig (Sus scrofa) [TaxId: 9823]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.86