Protein Concepts Dictionary

Tableau information

Concept source:  d3td4b_  amino acid (a.a.) range (HIS219)(THR336)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EHEHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (HIS219)  (PHE233) E1
	  (LYS246)  (TYR259) H2
	  (ASN261)  (ASP271) E3
	  (ARG276)  (ASN299) H4
	  (ASP301)  (SER306) H5
	  (SER306)  (ALA311) E6
	  (THR321)  (ARG329) H7
	  (ARG330)  (THR336) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
H2     -158.7°   H2                                               
E3      -19.8°  151.6°   E3                                        
H4      129.5°  -62.1°  146.0°   H4                                 
H5      -73.1°  107.8°  -53.3°  143.9°   H5                          
E6      -31.9°  145.1°  -12.5°  150.9°   41.2°   E6                   
H7      132.9°  -34.7° -145.2°  -52.2° -137.9° -152.9°   H7            
E8      176.3°   19.8°  163.4°  -48.4°  110.3°  151.6°  -43.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2hqsc_ :    (ASN69)  (TYR173)   [view usage] : d.79.7.1 |Bacillus chorismate mutase-like |OmpA-like |OmpA-like |automated matches |Escherichia coli [TaxId: 562]
 d4pwtc_ :    (ASN64)  (TYR168)   [view usage] : d.79.7.1 |Bacillus chorismate mutase-like |OmpA-like |OmpA-like |automated matches |Yersinia pestis [TaxId: 214092]
 d3td4b_ :   (HIS219)  (THR336)   [view usage] : d.79.7.0 |Bacillus chorismate mutase-like |OmpA-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
 d2hqsg_ :    (ASN69)  (TYR173)   [view usage] : d.79.7.1 |Bacillus chorismate mutase-like |OmpA-like |OmpA-like |automated matches |Escherichia coli [TaxId: 562]
 d3td3a_ :   (MET220)  (GLY337)   [view usage] : d.79.7.0 |Bacillus chorismate mutase-like |OmpA-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
 d4pwta_ :    (ASN64)  (TYR168)   [view usage] : d.79.7.1 |Bacillus chorismate mutase-like |OmpA-like |OmpA-like |automated matches |Yersinia pestis [TaxId: 214092]
 d3td3h_ :   (ASP225)  (GLY337)   [view usage] : d.79.7.0 |Bacillus chorismate mutase-like |OmpA-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.79