Tableau information
Concept source: d1tjya_ amino acid (a.a.) range (GLU28)(ASP116)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU28) (PRO34) E1
(GLY40) (LEU56) H2
(ASP59) (PRO65) E3
(SER69) (GLY84) H4
(ASP86) (SER91) E5
(SER94) (PRO100) H6
(PRO100) (GLY109) H7
(LYS111) (ASP116) E8
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 168.8° H2
E3 -26.6° 163.9° E3
H4 178.4° -11.8° 153.3° H4
E5 -14.0° 154.8° -40.3° 166.4° E5
H6 147.5° -43.7° 121.4° -32.0° 161.5° H6
H7 -165.6° 5.0° 163.7° 15.4° -151.9° -46.3° H7
E8 -27.1° 143.3° -52.7° 152.4° -17.4° 162.3° -142.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2qvca_ : (LEU32) (ASP119) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d3rotb_ : (LYS24) (ASP112) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Legionella pneumophila [TaxId: 272624]
d3l6ua_ : (VAL11) (ASP96) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Exiguobacterium sibiricum [TaxId: 262543]
d3t95a_ : (GLU27) (ASP115) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |automated matches |Yersinia pestis [TaxId: 214092]
d3ejwa_ : (GLN3) (ASP90) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
d4pz0a_ : (VAL34) (ASP122) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |automated matches |Bacillus anthracis [TaxId: 198094]
d1tjya_ : (GLU28) (ASP116) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |AI-2 receptor LsrB |Salmonella typhi [TaxId: 90370]
d4wuta_ : (ILE26) (ASP114) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Agrobacterium vitis [TaxId: 311402]
d3d02a_ : (LYS29) (GLU117) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 272620]
d1tm2a_ : (ARG29) (ASP116) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |AI-2 receptor LsrB |Salmonella typhi [TaxId: 90370]
d3rota_ : (LYS24) (ASP112) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Legionella pneumophila [TaxId: 272624]
d1guba_ : (GLU3) (ASP91) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |D-allose-binding protein |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.93