Protein Concepts Dictionary

Tableau information

Concept source:  d3muea_  amino acid (a.a.) range (ALA0)(ALA94)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ALA0)    (THR6) E1
	    (THR6)   (GLY21) H2
	   (ARG23)   (THR29) E3
	   (HIS37)   (ARG47) H4
	   (VAL50)   (PHE56) E5
	   (PRO65)   (TYR71) H6
	   (GLN76)   (LYS86) H7
	   (ASP88)   (ALA94) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
H2     -130.3°   H2                                               
E3      -64.6°  150.1°   E3                                        
H4      105.7°  -35.4°  170.1°   H4                                 
E5      -43.8° -162.0°  -21.7°  149.1°   E5                          
H6     -145.7°   70.2°  113.1°  -75.8° -124.9°   H6                   
H7      137.6°    9.1°  150.9°  -36.7°  169.0°   61.1°   H7            
E8      -26.1° -155.9°  -41.5°  129.4°  -19.9° -131.3°  163.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ag6a_ :     (MET1)   (ALA95)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
 d1ihoa_ :     (MET1)   (SER94)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Escherichia coli [TaxId: 562]
 d1n2ja_ :    (GLU10)  (THR105)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]
 d3muec_ :     (ALA0)   (ALA94)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Salmonella typhimurium [TaxId: 99287]
 d3q10a_ :     (ALA0)   (ALA94)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |automated matches |Yersinia pestis [TaxId: 632]
 d3q10c_ :     (MET1)   (ALA94)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |automated matches |Yersinia pestis [TaxId: 632]
 d3n8ha_ :     (ALA0)   (SER93)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Francisella tularensis [TaxId: 177416]
 d2x3fa_ :     (THR2)   (ALA95)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Staphylococcus aureus [TaxId: 282458]
 d3innc_ :     (SER0)   (THR94)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Brucella melitensis [TaxId: 29459]
 d3q12d_ :     (MET1)   (ALA94)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |automated matches |Yersinia pestis [TaxId: 632]
 d3mxta_ :     (ALA0)   (ASP93)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
 d1mopa_ :    (GLU10)  (THR105)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]
 d3muea_ :     (ALA0)   (ALA94)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Salmonella typhimurium [TaxId: 99287]
 d3qtta_ :     (MSE4)   (SER96)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Francisella tularensis [TaxId: 177416]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.26