Tableau information
Concept source: d4p8sa_ amino acid (a.a.) range (GLU109)(GLY203)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU109) (LEU113) E1
(ASP125) (GLU131) H2
(GLN134) (LEU138) E3
(ASN149) (VAL155) H4
(GLN158) (LEU162) E5
(ASP173) (ALA179) H6
(SER182) (LEU186) E7
(HIS197) (GLY203) H8
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 160.3° H2
E3 2.9° 163.1° E3
H4 -159.2° 2.0° 162.1° H4
E5 4.7° 164.9° 1.8° 163.8° E5
H6 -153.4° 10.9° -156.3° 8.9° 157.8° H6
E7 7.5° 167.7° 4.6° 166.6° 2.8° 160.5° E7
H8 -151.7° 12.4° -154.5° 10.4° -156.0° 1.8° 158.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2r9ua_ : (GLN52) (HIS150) [view usage] : c.10.2.0 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |automated matches |automated matches |Sea lamprey (Petromyzon marinus) [TaxId: 7757]
d1gwba_ : (THR119) (GLY209) [view usage] : c.10.2.7 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Ngr ectodomain-like |von Willebrand factor binding domain of glycoprotein Ib alpha |Human (Homo sapiens) [TaxId: 9606]
d3g3ba_ : (GLN32) (GLN129) [view usage] : c.10.2.0 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |automated matches |automated matches |Sea lamprey (Petromyzon marinus) [TaxId: 7757]
d1h6ta2 : (ASP79) (LEU163) [view usage] : c.10.2.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Internalin LRR domain |Internalin B |Listeria monocytogenes [TaxId: 1639]
d1io0a_ : (LYS227) (ARG343) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |Tropomodulin C-terminal domain |Chicken (Gallus gallus) [TaxId: 9031]
d4peqd_ : (MET1) (GLY98) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |automated matches |Cow (Bos taurus) [TaxId: 9913]
d2v9tb_ : (THR303) (HIS396) [view usage] : c.10.2.0 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1dcea3 : (ARG444) (CYS532) [view usage] : c.10.2.2 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Rab geranylgeranyltransferase alpha-subunit, C-terminal domain |Rab geranylgeranyltransferase alpha-subunit, C-terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3g3aa_ : (GLN32) (GLN129) [view usage] : c.10.2.0 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |automated matches |automated matches |Sea lamprey (Petromyzon marinus) [TaxId: 7757]
d3twid_ : (GLN52) (HIS150) [view usage] : c.10.2.0 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |automated matches |automated matches |Sea lamprey (Petromyzon marinus) [TaxId: 7757]
d3tsre_ : (MET1) (LEU100) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3tsre_ : (ARG111) (LYS221) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4p91a_ : (GLN134) (SER227) [view usage] : c.10.2.0 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2o6ra_ : (THR54) (THR147) [view usage] : c.10.2.0 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |automated matches |automated matches |Inshore hagfish (Eptatretus burgeri) [TaxId: 7764]
d3wo9a_ : (THR93) (VAL186) [view usage] : c.10.2.0 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |automated matches |automated matches |Lethenteron camtschaticum [TaxId: 980415]
d3g3bc_ : (GLN32) (GLN129) [view usage] : c.10.2.0 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |automated matches |automated matches |Sea lamprey (Petromyzon marinus) [TaxId: 7757]
d1dfji_ : (GLU311) (GLN419) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |Ribonuclease inhibitor |Pig (Sus scrofa) [TaxId: 9823]
d3twie1 : (GLN52) (HIS150) [view usage] : c.10.2.0 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |automated matches |automated matches |Sea lamprey (Petromyzon marinus) [TaxId: 7757]
d2bexa_ : (GLU315) (GLN423) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.10