Tableau information
Concept source: d4o7md_ amino acid (a.a.) range (MSE155)(LYS225)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(MSE155) (SER161) E1
(LEU166) (GLN171) H2
(LYS173) (MSE178) E3
(SER180) (GLU191) H4
(ALA192) (LYS196) E5
(PRO198) (ARG209) H6
(ASP212) (ASN216) E7
(THR217) (LYS225) H8
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 52.7° H2
E3 140.2° -90.4° E3
H4 -50.2° -100.1° 169.4° H4
E5 111.0° 63.3° -29.2° -161.1° E5
H6 31.3° 84.0° -161.3° -25.3° 136.8° H6
E7 162.9° -127.5° -37.3° 132.4° -64.4° -142.1° E7
H8 -43.0° 42.1° 100.8° -88.3° 73.4° -63.5° 123.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4p8ba_ : (GLU156) (LYS225) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Cupriavidus necator [TaxId: 381666]
d4mmpa_ : (THR128) (LYS198) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Pasteurella multocida [TaxId: 1169409]
d2ieea_ : (TYR107) (PHE191) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2hpgb_ : (TYR156) (GLY226) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d4o7md_ : (MSE155) (LYS225) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Shewanella loihica [TaxId: 323850]
d4n6ka_ : (PHE153) (LYS223) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Desulfovibrio salexigens [TaxId: 526222]
d2hpga_ : (TYR156) (GLY226) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d4ovta_ : (ILE148) (LYS218) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Ochrobactrum anthropi [TaxId: 439375]
d4nn3a_ : (ARG151) (LYS221) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Desulfovibrio salexigens [TaxId: 526222]
d4pfba_ : (PHE147) (LYS217) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Fusobacterium nucleatum [TaxId: 190304]
d4o7mb_ : (MSE155) (LYS225) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Shewanella loihica [TaxId: 323850]
d2wypa_ : (THR126) (LYS196) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Haemophilus influenzae [TaxId: 727]
d4o7mc_ : (MSE155) (LYS225) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Shewanella loihica [TaxId: 323850]
d4o7ma_ : (MSE155) (LYS225) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Shewanella loihica [TaxId: 323850]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94