Tableau information
Concept source: d1oyya2 amino acid (a.a.) range (CYS43)(LEU128)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(CYS43) (PRO48) E1
(GLY52) (LEU64) H2
(GLY66) (SER72) E3
(LEU77) (GLY89) H4
(ALA91) (SER97) E5
(THR100) (THR113) H6
(ARG117) (ALA122) E7
(ALA122) (LEU128) H8
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 147.5° H2
E3 -43.1° -159.8° E3
H4 103.9° -48.3° 147.0° H4
E5 -87.5° 115.3° -46.2° -160.6° E5
H6 123.4° 53.7° -143.7° 45.8° -138.3° H6
E7 -66.5° 139.0° -23.5° -169.6° -23.8° -142.5° E7
H8 -164.5° 38.0° -126.2° -85.7° 80.2° -71.9° 102.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2jlra1 : (SER330) (GLY414) [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |automated matches |Dengue virus 4 [TaxId: 408688]
d1wp9a1 : (ASN25) (GLY119) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |putative ATP-dependent RNA helicase PF2015 |Pyrococcus furiosus [TaxId: 2261]
d2eyqa3 : (ASP623) (ASP717) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Transcription-repair coupling factor, TRCF |Escherichia coli [TaxId: 562]
d1oywa2 : (ASP42) (LEU128) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |RecQ helicase domain |Escherichia coli [TaxId: 562]
d2jlsa1 : (PRO331) (GLY414) [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |automated matches |Dengue virus 4 [TaxId: 408688]
d1c4oa2 : (LEU416) (ILE506) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Nucleotide excision repair enzyme UvrB |Thermus thermophilus [TaxId: 274]
d2eyqa4 : (GLU15) (GLN115) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Transcription-repair coupling factor, TRCF |Escherichia coli [TaxId: 562]
d2v6ia2 : (SER146) (GLY230) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Kokobera virus [TaxId: 44024]
d1z3ix2 : (TYR171) (HIS275) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Rad54-like, Rad54L |Zebrafish (Danio rerio) [TaxId: 7955]
d1d9xa2 : (THR421) (GLU507) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Nucleotide excision repair enzyme UvrB |Bacillus caldotenax [TaxId: 1395]
d1oyya2 : (CYS43) (LEU128) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |RecQ helicase domain |Escherichia coli [TaxId: 562]
d2jlqa1 : (PRO331) (GLY414) [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |automated matches |Dengue virus 4 [TaxId: 408688]
d2jlua1 : (PRO331) (GLY414) [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |automated matches |Dengue virus 4 [TaxId: 408688]
d2eyqb4 : (GLU15) (GLN115) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Transcription-repair coupling factor, TRCF |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.37