Protein Concepts Dictionary

Tableau information

Concept source:  d3ub5a1  amino acid (a.a.) range (ASP51)(GLY146)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP51)   (GLY55) E1
	   (GLY55)   (LYS61) H2
	   (THR66)   (ILE71) E3
	   (TRP79)   (ARG95) H4
	  (VAL103)  (ALA108) E5
	  (PRO112)  (ASN128) H6
	  (PRO130)  (ILE136) E7
	  (ILE136)  (GLY146) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
H2     -106.8°   H2                                               
E3      -53.5° -144.9°   E3                                        
H4      -64.4°  105.7°  -91.7°   H4                                 
E5       78.2°  -61.7°  -84.4°  135.4°   E5                          
H6     -108.8°   98.9° -114.5°  -44.8°  160.5°   H6                   
E7       57.0°  -70.4°  -74.6°  115.7°  -21.4°  155.8°   E7            
H8      -31.4° -114.2°  -66.0°   33.7° -108.5°  -77.4°   87.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ub5a1 :    (ASP51)  (GLY146)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Cow (Bos taurus) [TaxId: 9913]
 d3eksa1 :    (ASP51)  (GLY146)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d1lcub1 :  (ASP1061) (GLY1156)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d2wusa1 :    (SER30)  (ASN140)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Prokaryotic actin homolog MreB |Thermotoga maritima [TaxId: 2336]
 d4jhda1 :    (ASP51)  (GLY146)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d1ijjb1 :   (ASP451)  (GLY546)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1yaga1 :    (ASP51)  (GLY146)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2wusb1 :    (LEU42)  (ASN140)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Prokaryotic actin homolog MreB |Thermotoga maritima [TaxId: 2336]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55