Protein Concepts Dictionary

Tableau information

Concept source:  d4mf7a1  amino acid (a.a.) range (ILE21)(THR101)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ILE21)   (SER25) E1
	   (THR28)   (GLY42) H2
	   (GLU46)   (ASP51) E3
	   (THR59)   (ASN66) H4
	   (ILE71)   (ASP76) E5
	   (ASP76)   (GLY79) H6
	   (LYS83)   (GLU89) E7
	   (SER90)  (THR101) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
H2     -154.9°   H2                                               
E3      -18.5° -169.7°   E3                                        
H4     -116.1°   67.2° -121.0°   H4                                 
E5      173.4°   27.4°  157.1°   70.3°   E5                          
H6      113.5°   91.4°   97.1°   72.7°  -65.9°   H6                   
E7      -23.8°  139.4°  -39.0°  -94.3°  162.7°  118.2°   E7            
H8     -155.6°    4.6° -172.9°   62.6°   27.8°   89.8° -137.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4nhzb1 :    (ILE21)  (THR101)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bradyrhizobium sp. [TaxId: 288000]
 d4nhzh1 :    (ILE21)  (THR101)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bradyrhizobium sp. [TaxId: 288000]
 d4naxb1 :    (LEU21)  (SER101)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Pseudomonas putida [TaxId: 351746]
 d4mf6a1 :    (LEU21)  (LYS100)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Burkholderia graminis [TaxId: 396598]
 d4mf7a1 :    (ILE21)  (THR101)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bradyrhizobium sp. [TaxId: 288000]
 d4mf5a1 :    (LEU21)  (LYS100)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Burkholderia graminis [TaxId: 396598]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.47