Protein Concepts Dictionary

Tableau information

Concept source:  d4e4gc_  amino acid (a.a.) range (LYS249)(VAL347)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EHEHEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LYS249)  (MSE255) E1
	  (ASP259)  (GLY273) H2
	  (SER283)  (VAL288) E3
	  (GLU290)  (SER306) H4
	  (SER306)  (PRO311) E5
	  (ASP318)  (THR324) E6
	  (THR324)  (GLY342) H7
	  (GLY342)  (VAL347) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
H2     -171.3°   H2                                               
E3      -25.2° -160.0°   E3                                        
H4      124.5°  -48.3°  148.6°   H4                                 
E5      158.3°  -22.2°  165.2°  -43.9°   E5                          
E6     -150.1°   35.6° -125.1°  -83.6°  -50.0°   E6                   
H7      -48.7°  132.3°  -30.4° -142.5° -152.9°  103.4°   H7            
E8       82.0°  -92.6°  107.0°  -46.4°  -79.3° -127.9° -124.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4e4ga_ :   (ALA242)  (VAL347)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d3ek1a_ :   (ASN260)  (THR357)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
 d3k2wh_ :   (MET253)  (THR356)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudoalteromonas atlantica [TaxId: 342610]
 d3ju8a_ :   (ASN250)  (LEU347)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d4knab_ :   (ASN249)  (ILE346)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
 d4e4gc_ :   (LYS249)  (VAL347)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d4qn2a_ :   (ASN251)  (VAL356)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
 d4e4gb_ :   (LYS249)  (VAL347)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d3ju8b_ :   (ASN250)  (LEU347)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d4qn2b_ :   (THR250)  (VAL356)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.82