Protein Concepts Dictionary

Tableau information

Concept source:  d1skrb_  amino acid (a.a.) range (LYS3)(LEU107)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EHEHEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LYS3)    (THR8) E1
	   (ASP13)   (ALA19) H2
	   (ALA22)   (TRP28) E3
	   (CYS32)   (TYR49) H4
	   (THR54)   (ASN59) E5
	   (PRO76)   (LYS82) E6
	   (ALA87)   (VAL91) E7
	   (SER95)  (LEU107) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
H2     -123.8°   H2                                               
E3      -59.0° -143.4°   E3                                        
H4      131.0°   54.2° -156.9°   H4                                 
E5      -41.3° -146.9°  -17.9° -157.9°   E5                          
E6      101.5°  -51.8°  159.2°  -33.5°  141.6°   E6                   
E7      -84.0°  125.5°  -25.9°  141.2°  -43.7°  174.4°   E7            
H8       83.6°  -56.7°  142.6°  -53.6°  124.9°  -20.1°  165.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2h6za_ :     (LYS3)  (ALA108)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
 d2h74a_ :     (LYS3)  (ALA108)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
 d1txxa_ :     (LYS3)  (ASN106)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
 d2tira_ :     (LYS3)  (ASN106)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
 d2fchd_ :     (LYS3)  (ALA108)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
 d2h6ya_ :     (LYS3)  (ALA108)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
 d2h75a_ :     (LYS3)  (ALA108)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
 d1skrb_ :     (LYS3)  (LEU107)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
 d2h73a_ :     (LYS3)  (ALA108)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
 d2h71a_ :     (LYS3)  (ALA108)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
 d2h76a_ :     (LYS3)  (ALA108)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.47