Tableau information
Concept source: d2itlb_ amino acid (a.a.) range (ALA157)(GLU245)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: EHEEHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA157) (THR163) E1
(LYS165) (SER180) H2
(THR182) (TYR190) E3
(HIS192) (HIS201) E4
(ARG204) (CYS216) H5
(SER219) (GLY225) E6
(GLU229) (ARG238) H7
(PRO240) (GLU245) E8
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 157.5° H2
E3 -31.6° 167.6° E3
E4 159.3° 2.9° 164.6° E4
H5 -31.7° 128.9° -62.4° 131.6° H5
E6 158.2° -44.1° 126.6° -41.9° 164.7° E6
H7 32.4° -148.5° 43.2° -151.2° -36.6° 138.9° H7
E8 109.5° -51.4° 140.4° -54.3° 78.1° -91.4° -102.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4lmdb_ : (ALA158) (GLU246) [view usage] : d.89.1.1 |Origin of replication-binding domain, RBD-like |Origin of replication-binding domain, RBD-like |The origin DNA-binding domain of SV40 T-antigen |The origin DNA-binding domain of SV40 T-antigen |Jc polyomavirus [TaxId: 10632]
d4lifa_ : (ALA158) (GLU246) [view usage] : d.89.1.1 |Origin of replication-binding domain, RBD-like |Origin of replication-binding domain, RBD-like |The origin DNA-binding domain of SV40 T-antigen |The origin DNA-binding domain of SV40 T-antigen |Jc polyomavirus [TaxId: 10632]
d2itja_ : (ALA157) (GLU245) [view usage] : d.89.1.1 |Origin of replication-binding domain, RBD-like |Origin of replication-binding domain, RBD-like |The origin DNA-binding domain of SV40 T-antigen |The origin DNA-binding domain of SV40 T-antigen |Simian virus 40, Sv40 [TaxId: 10633]
d4lmda_ : (ALA158) (GLU246) [view usage] : d.89.1.1 |Origin of replication-binding domain, RBD-like |Origin of replication-binding domain, RBD-like |The origin DNA-binding domain of SV40 T-antigen |The origin DNA-binding domain of SV40 T-antigen |Jc polyomavirus [TaxId: 10632]
d2itla_ : (ALA157) (GLU245) [view usage] : d.89.1.1 |Origin of replication-binding domain, RBD-like |Origin of replication-binding domain, RBD-like |The origin DNA-binding domain of SV40 T-antigen |The origin DNA-binding domain of SV40 T-antigen |Simian virus 40, Sv40 [TaxId: 10633]
d1z1db1 : (CYS30) (GLU117) [view usage] : d.89.1.1 |Origin of replication-binding domain, RBD-like |Origin of replication-binding domain, RBD-like |The origin DNA-binding domain of SV40 T-antigen |The origin DNA-binding domain of SV40 T-antigen |Simian virus 40, Sv40 [TaxId: 10633]
d2itlb_ : (ALA157) (GLU245) [view usage] : d.89.1.1 |Origin of replication-binding domain, RBD-like |Origin of replication-binding domain, RBD-like |The origin DNA-binding domain of SV40 T-antigen |The origin DNA-binding domain of SV40 T-antigen |Simian virus 40, Sv40 [TaxId: 10633]
d2ntcb_ : (ALA157) (GLU245) [view usage] : d.89.1.1 |Origin of replication-binding domain, RBD-like |Origin of replication-binding domain, RBD-like |The origin DNA-binding domain of SV40 T-antigen |The origin DNA-binding domain of SV40 T-antigen |Simian virus 40, Sv40 [TaxId: 10633]
d3qfqe_ : (SER334) (ASN423) [view usage] : d.89.1.0 |Origin of replication-binding domain, RBD-like |Origin of replication-binding domain, RBD-like |automated matches |automated matches |Merkel cell polyomavirus [TaxId: 493803]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.89