Protein Concepts Dictionary

Tableau information

Concept source:  d4hgra_  amino acid (a.a.) range (LYS5)(GLY76)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EHEEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LYS5)   (ILE11) E1
	   (ILE11)   (ASP17) H2
	   (GLY18)   (GLN24) E3
	   (ASN27)   (ASN33) E4
	   (ASN33)   (GLY47) H5
	   (PRO49)   (GLY55) E6
	   (THR58)   (LYS69) H7
	   (ASP71)   (GLY76) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
H2      -77.1°   H2                                               
E3      -40.1°   86.3°   E3                                        
E4      133.2°   64.5°  148.5°   E4                                 
H5     -163.2°  118.4° -129.5°   63.2°   H5                          
E6      -32.0° -106.6°  -55.5°  141.6°  134.7°   E6                   
H7      144.2°   68.7°  124.7°  -35.3°  -49.9°  174.9°   H7            
E8      -42.8° -116.8°  -62.1°  140.7°  124.0°  -10.8°  172.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3mmzc_ :    (ASP13)   (HIS82)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Streptomyces avermitilis [TaxId: 227882]
 d4hgrf_ :     (LYS5)   (GLY76)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 226186]
 d4hgod_ :     (LYS5)   (GLY76)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 226186]
 d4hgra_ :     (LYS5)   (GLY76)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 226186]
 d3mmzd_ :    (ASP13)   (HIS82)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Streptomyces avermitilis [TaxId: 227882]
 d3mmza_ :    (ASP13)   (HIS82)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Streptomyces avermitilis [TaxId: 227882]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.108