Protein Concepts Dictionary

Tableau information

Concept source:  d3ooja1  amino acid (a.a.) range (ALA1)(HIS97)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EHEEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ALA1)    (ILE7) E1
	   (ALA13)   (GLU24) H2
	   (SER30)   (VAL36) E3
	   (MET42)   (LEU48) E4
	   (VAL51)   (GLU59) H5
	   (GLU60)   (GLY65) E6
	   (THR67)   (ARG73) E7
	   (HIS92)   (HIS97) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
H2      156.2°   H2                                               
E3      -14.3°  157.3°   E3                                        
E4      160.2°  -25.8°  174.4°   E4                                 
H5      -32.1° -164.3°  -36.6°  139.4°   H5                          
E6      -59.6°  107.6°   50.8° -133.3°  -87.3°   E6                   
E7      174.5°  -24.2°  170.7°  -14.6°  145.2°  125.1°   E7            
E8     -138.7°   18.1° -144.2°   36.4° -155.9° -101.7°   40.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1jxaa2 :     (CYS1)   (GLU91)   [view usage] : d.153.1.1 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Class II glutamine amidotransferases |Glucosamine 6-phosphate synthase, N-terminal domain |Escherichia coli [TaxId: 562]
 d3ooja1 :     (ALA1)   (HIS97)   [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d3oojg1 :     (ALA1)   (HIS97)   [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d1xffa_ :     (CYS1)   (HIS97)   [view usage] : d.153.1.1 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Class II glutamine amidotransferases |Glucosamine 6-phosphate synthase, N-terminal domain |Escherichia coli [TaxId: 562]
 d3oojf1 :     (ALA1)   (HIS97)   [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d3oojd1 :     (ALA1)   (HIS97)   [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.153