Tableau information
Concept source: d1d4m1_ amino acid (a.a.) range (PHE90)(PRO184)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: EHEEEHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE90) (PRO94) E1
(VAL101) (THR111) H2
(THR111) (PHE115) E3
(GLU118) (GLN127) E4
(LEU140) (TYR146) E5
(TYR160) (PRO168) H6
(PRO168) (THR173) E7
(PRO178) (PRO184) E8
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -20.1° H2
E3 -125.6° 108.0° E3
E4 149.6° -164.5° -84.8° E4
E5 -25.0° -21.0° -120.8° 143.8° E5
H6 43.0° 36.4° -86.2° -157.6° 57.3° H6
E7 142.8° 152.6° 67.8° -40.3° 167.2° -117.3° E7
E8 -28.4° -15.0° -109.8° 151.9° -11.3° 50.4° 167.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1mqta_ : (PHE89) (PRO183) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Swine vesicular disease virus coat proteins |Swine vesicular disease virus [TaxId: 12075]
d4cdqa_ : (GLY105) (SER191) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Human enterovirus 71 [TaxId: 39054]
d1r1a1_ : (ASN95) (PRO185) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus A 1A (HRV-1A) [TaxId: 12134]
d1ar61_ : (LYS103) (PRO197) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Poliovirus coat proteins |Poliovirus type 1, strain Mahoney [TaxId: 12080]
d2x5ia_ : (TYR90) (PRO184) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |automated matches |Human echovirus 7 [TaxId: 46018]
d3vbfa_ : (GLY105) (SER191) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Human enterovirus 71 [TaxId: 39054]
d1d4m1_ : (PHE90) (PRO184) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Human enterovirus B coat proteins |Human coxsackievirus A9 [TaxId: 12067]
d4cewa_ : (GLY105) (SER191) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Human enterovirus 71 [TaxId: 39054]
d3zfea_ : (GLY105) (SER191) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Human enterovirus 71 [TaxId: 39054]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.121