Tableau information
Concept source: d2aclb1 amino acid (a.a.) range (GLU309)(TRP441)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: EEHHHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU309) (LEU314) E1
(ASP316) (ASN320) E2
(ASN320) (GLY328) H3
(VAL331) (GLN348) H4
(ASN350) (PHE363) H5
(GLN373) (PRO396) H6
(LEU400) (ASP430) H7
(PRO435) (TRP441) H8
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 148.7° E2
H3 62.8° -87.0° H3
H4 86.0° -119.1° 144.3° H4
H5 -81.6° 68.0° -34.3° 130.2° H5
H6 117.2° -94.0° 159.4° 50.5° -160.1° H6
H7 -81.2° 78.0° -35.5° -161.0° -61.7° 124.8° H7
H8 117.5° -53.7° -95.3° 83.6° 61.0° -101.8° -114.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3l0ea_ : (GLU325) (ASP458) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1naxa_ : (GLU326) (PRO452) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Thyroid hormone receptor beta (TR-beta) |Human (Homo sapiens) [TaxId: 9606]
d2pinb_ : (GLU326) (GLU460) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Thyroid hormone receptor beta (TR-beta) |Human (Homo sapiens) [TaxId: 9606]
d2acld_ : (GLU309) (ILE440) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Oxysterols receptor LXR-alpha |Mouse (Mus musculus) [TaxId: 10090]
d2lbda_ : (ASP284) (GLU417) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoic acid receptor gamma (RAR-gamma) |Human (Homo sapiens) [TaxId: 9606]
d1fcya_ : (ASP284) (LEU416) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoic acid receptor gamma (RAR-gamma) |Human (Homo sapiens) [TaxId: 9606]
d1xdkb_ : (ASP275) (MET406) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoic acid receptor beta (RAR-beta) |Mouse (Mus musculus) [TaxId: 10090]
d4n1yc_ : (LYS338) (ALA472) [view usage] : a.123.1.0 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |automated matches |Crassostrea gigas [TaxId: 29159]
d1pq6b_ : (GLU325) (TRP457) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Oxysterols receptor LXR-beta |Human (Homo sapiens) [TaxId: 9606]
d2aclb1 : (GLU309) (TRP441) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Oxysterols receptor LXR-alpha |Mouse (Mus musculus) [TaxId: 10090]
d4dm6a_ : (ASP284) (MET415) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoic acid receptor beta (RAR-beta) |Human (Homo sapiens) [TaxId: 9606]
d3fald_ : (GLU309) (TRP441) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Oxysterols receptor LXR-alpha |Mouse (Mus musculus) [TaxId: 10090]
d2aclh_ : (GLU309) (TRP441) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Oxysterols receptor LXR-alpha |Mouse (Mus musculus) [TaxId: 10090]
d3kmra_ : (ASP282) (MET413) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoic acid receptor alpha (RAR-alpha) |Human (Homo sapiens) [TaxId: 9606]
d2j4aa_ : (GLU326) (PRO452) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.123