Protein Concepts Dictionary

Tableau information

Concept source:  d4qbbc_  amino acid (a.a.) range (MET29)(VAL127)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEHHHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (MET29)   (ASN35) E1
	   (GLU37)   (ASN47) E2
	   (ASN50)   (VAL63) H3
	   (PHE68)   (SER74) H4
	   (LEU78)   (LEU89) H5
	  (ALA101)  (ILE107) H6
	  (HIS112)  (THR117) E7
	  (GLU123)  (VAL127) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      132.9°   E2                                               
H3      -55.2°  165.1°   H3                                        
H4     -131.8°   81.4° -101.2°   H4                                 
H5       49.1°  -90.0°   90.3° -165.2°   H5                          
H6      -74.1°  111.1°  -56.3° -131.5°   62.9°   H6                   
E7       66.5°  -75.7°  117.6°  101.4°  -64.6° -127.0°   E7            
E8       97.3°  -44.1°  149.8°   88.2°  -77.2° -134.1°  -32.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1qmya_ :    (MET29)  (VAL127)   [view usage] : d.3.1.2 |Cysteine proteinases |Cysteine proteinases |FMDV leader protease |FMDV leader protease |Foot-and-mouth disease virus [TaxId: 12110]
 d1qolc_ :    (MET29)  (VAL127)   [view usage] : d.3.1.2 |Cysteine proteinases |Cysteine proteinases |FMDV leader protease |FMDV leader protease |Foot-and-mouth disease virus [TaxId: 12110]
 d4qbbb_ :    (MET29)  (VAL127)   [view usage] : d.3.1.2 |Cysteine proteinases |Cysteine proteinases |FMDV leader protease |automated matches |Foot-and-mouth disease virus [TaxId: 73482]
 d4qbba_ :    (MET29)  (VAL127)   [view usage] : d.3.1.2 |Cysteine proteinases |Cysteine proteinases |FMDV leader protease |automated matches |Foot-and-mouth disease virus [TaxId: 73482]
 d4qbbc_ :    (MET29)  (VAL127)   [view usage] : d.3.1.2 |Cysteine proteinases |Cysteine proteinases |FMDV leader protease |automated matches |Foot-and-mouth disease virus [TaxId: 73482]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   d.3