Protein Concepts Dictionary

Tableau information

Concept source:  d3znkb_  amino acid (a.a.) range (TYR22)(GLY155)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEHHHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (TYR22)   (ASN28) E1
	   (GLY33)   (GLU39) E2
	   (GLU39)   (ASN60) H3
	   (ARG75)  (MET102) H4
	  (GLU103)  (LEU126) H5
	  (ASN129)  (GLY134) E6
	  (GLY136)  (HIS142) E7
	  (ASP145)  (GLY155) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      145.6°   E2                                               
H3     -162.7°  -51.6°   H3                                        
H4      -20.7°  124.9°  175.1°   H4                                 
H5      -35.9°  109.7°  161.1°  -15.3°   H5                          
E6      121.1°  -90.8°  -42.4°  139.0° -151.5°   E6                   
E7      -34.8°  111.7°  162.1°   16.7°    9.8°  155.5°   E7            
H8      159.8°  -23.6°   33.5°  141.9°  128.0°  -68.0°  132.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4junf_ :    (TYR22)  (GLY155)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza a virus [TaxId: 365085]
 d4kthb_ :    (TYR22)  (GLY155)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
 d4kthd_ :    (TYR22)  (GLY155)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
 d1rd8b_ :    (TYR22)  (ASN154)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
 d4bgzf_ :    (TYR22)  (GLY155)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza virus [TaxId: 375457]
 d3s12b_ :    (TYR22)  (LYS153)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
 d4kthf_ :    (TYR22)  (GLY155)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
 d4k62b_ :   (TYR356)  (GLY489)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
 d4bgzb_ :    (TYR22)  (ASN154)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza virus [TaxId: 375457]
 d4cqyf_ :    (TYR22)  (GLY155)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza a virus (a/turkey/turkey/1/2005(h5n1)) [TaxId: 375457]
 d4uo7b_ :    (TYR22)  (GLY155)   [view usage] : h.3.1.0 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |automated matches |automated matches |Influenza a virus (a/canine/colorado/17864/2006(h3n8)) [TaxId: 867285]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   h.3