Protein Concepts Dictionary

Tableau information

Concept source:  d3c9rb1  amino acid (a.a.) range (THR28)(GLU137)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEHHEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR28)   (GLU32) E1
	   (LYS36)   (ASN46) E2
	   (ASN46)   (PHE51) H3
	   (PRO57)   (GLY76) H4
	   (LYS80)   (LEU86) E5
	   (SER95)  (TYR111) H6
	  (LYS112)  (LYS122) E7
	  (LYS125)  (GLU137) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      155.9°   E2                                               
H3     -110.4°   93.2°   H3                                        
H4      -50.2°  143.9°   80.2°   H4                                 
E5      132.2°  -24.9° -117.3°  136.6°   E5                          
H6      -53.6°  150.4°   58.7°  -32.4°  165.4°   H6                   
E7      114.6°  -43.8° -133.7°  122.1°  -19.2°  154.5°   E7            
E8      -39.8°  164.3°   71.3°  -33.6°  168.2°  -14.2°  149.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3c9ra1 :    (THR28)  (GLU137)   [view usage] : d.79.4.1 |Bacillus chorismate mutase-like |PurM N-terminal domain-like |PurM N-terminal domain-like |Thiamine monophosphate kinase (ThiL) N-terminal domain |Aquifex aeolicus [TaxId: 63363]
 d3c9tb1 :    (THR28)  (GLU137)   [view usage] : d.79.4.1 |Bacillus chorismate mutase-like |PurM N-terminal domain-like |PurM N-terminal domain-like |Thiamine monophosphate kinase (ThiL) N-terminal domain |Aquifex aeolicus [TaxId: 63363]
 d3c9ta1 :    (ASP27)  (GLU137)   [view usage] : d.79.4.1 |Bacillus chorismate mutase-like |PurM N-terminal domain-like |PurM N-terminal domain-like |Thiamine monophosphate kinase (ThiL) N-terminal domain |Aquifex aeolicus [TaxId: 63363]
 d3c9ub1 :    (THR28)  (GLU137)   [view usage] : d.79.4.1 |Bacillus chorismate mutase-like |PurM N-terminal domain-like |PurM N-terminal domain-like |Thiamine monophosphate kinase (ThiL) N-terminal domain |Aquifex aeolicus [TaxId: 63363]
 d3c9rb1 :    (THR28)  (GLU137)   [view usage] : d.79.4.1 |Bacillus chorismate mutase-like |PurM N-terminal domain-like |PurM N-terminal domain-like |Thiamine monophosphate kinase (ThiL) N-terminal domain |Aquifex aeolicus [TaxId: 63363]
 d3c9ua1 :    (THR28)  (GLU137)   [view usage] : d.79.4.1 |Bacillus chorismate mutase-like |PurM N-terminal domain-like |PurM N-terminal domain-like |Thiamine monophosphate kinase (ThiL) N-terminal domain |Aquifex aeolicus [TaxId: 63363]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.79