Protein Concepts Dictionary

Tableau information

Concept source:  d2hoha_  amino acid (a.a.) range (ASP3)(GLU102)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEHHEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ASP3)    (GLY7) E1
	    (SER8)   (SER12) E2
	   (SER12)   (GLY23) H3
	   (TYR24)   (GLY30) H4
	   (PRO55)   (PRO60) E5
	   (ALA75)   (ASN81) E6
	   (GLY88)   (HIS92) E7
	   (ASN98)  (GLU102) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      162.1°   E2                                               
H3       80.3°  -82.2°   H3                                        
H4       84.7°  -78.7°  -10.3°   H4                                 
E5      -69.7°  115.0°  114.7°  125.0°   E5                          
E6      135.6°  -36.6°  -67.1°  -58.8°  151.3°   E6                   
E7      -17.5°  158.7°   88.7°   95.4°  -52.2°  151.6°   E7            
E8      146.3°  -51.6° -131.6° -124.9°   99.3°  -66.7°  139.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1i2ga_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1lova_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1g02a_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1fysa_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d2hoha_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1i3ia_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1i0xd_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d2bira_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1ch0a_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1hyfa_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d3whoa_ :     (SER6)   (GLU98)   [view usage] : d.1.1.0 |Microbial ribonucleases |Microbial ribonucleases |automated matches |automated matches |Oyster mushroom (Pleurotus ostreatus) [TaxId: 5322]
 d5hoha_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   d.1