Protein Concepts Dictionary

Tableau information

Concept source:  d2buid2  amino acid (a.a.) range (VAL258)(ILE359)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (VAL258)  (ALA267) E1
	  (VAL270)  (GLY274) E2
	  (GLY274)  (MET285) H3
	  (ASP293)  (SER297) E4
	  (THR302)  (VAL316) H5
	  (ALA323)  (LYS328) E6
	  (VAL340)  (GLY353) H7
	  (GLY353)  (ILE359) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      118.3°   E2                                               
H3      160.6°  -57.5°   H3                                        
E4      -34.7° -152.9°  147.2°   E4                                 
H5      124.5°   24.3°  -43.1°  152.8°   H5                          
E6      -63.0°  178.7°  121.3°  -28.3°  155.1°   E6                   
H7      144.2°  -39.1°  -46.3°  155.8°  -50.2°  140.0°   H7            
E8      -27.4° -125.7°  171.7°   32.5° -143.0°   55.4°  130.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2byza2 :   (VAL258)  (ILE359)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d1h4fa2 :   (VAL258)  (ILE359)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoacyl-ACP synthase I |Escherichia coli [TaxId: 562]
 d2bywa2 :   (VAL258)  (ILE359)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d1fj4a2 :   (VAL258)  (ILE359)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoacyl-ACP synthase I |Escherichia coli [TaxId: 562]
 d4ddoa2 :   (ILE264)  (THR374)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Burkholderia vietnamiensis [TaxId: 269482]
 d2buid2 :   (VAL258)  (ILE359)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoacyl-ACP synthase I |Escherichia coli [TaxId: 562]
 d1dd8a2 :   (GLY259)  (ILE359)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoacyl-ACP synthase I |Escherichia coli [TaxId: 562]
 d3mqda2 :   (GLY257)  (ALA359)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
 d2byya2 :   (VAL258)  (ILE359)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.95