Protein Concepts Dictionary

Tableau information

Concept source:  d4k8pa_  amino acid (a.a.) range (ASP3)(GLY77)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ASP3)    (GLY8) E1
	   (VAL12)   (ARG17) E2
	   (GLN21)   (GLN27) H3
	   (ALA32)   (ASP37) E4
	   (ASP37)   (MSE48) H5
	   (PRO50)   (SER55) E6
	   (ALA59)   (GLY70) H7
	   (LYS72)   (GLY77) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2       73.4°   E2                                               
H3       54.9°  123.3°   H3                                        
E4      -56.7°  123.9°   42.0°   E4                                 
H5       94.9°   39.3°  148.7° -117.4°   H5                          
E6     -134.3°  143.4°  -79.5°  -92.4°  130.7°   E6                   
H7     -156.4°  -93.3°  143.2°  122.3°  -63.9°   67.0°   H7            
E8      -16.7°   89.7°   38.5°  -44.9° -110.6° -118.0° -163.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3uboa_ :     (ASP5)   (LYS80)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
 d4k8ka_ :     (ASP3)   (GLY77)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Rhizobium etli [TaxId: 347834]
 d4e3aa_ :     (ASP3)   (GLY77)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Rhizobium etli [TaxId: 347834]
 d3ubob_ :     (ASP5)   (GLY79)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
 d4k8pa_ :     (ASP3)   (GLY77)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Rhizobium etli [TaxId: 347834]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.72