Protein Concepts Dictionary

Tableau information

Concept source:  d4ot8b_  amino acid (a.a.) range (GLY310)(PHE411)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEHEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY310)  (SER314) E1
	  (HIS315)  (LEU321) E2
	  (THR327)  (HIS339) H3
	  (THR341)  (ALA346) E4
	  (GLY359)  (PRO365) E5
	  (PRO365)  (GLY371) H6
	  (PRO374)  (ASN390) H7
	  (ASP393)  (PHE411) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2     -150.4°   E2                                               
H3      -49.4°  116.0°   H3                                        
E4      131.3°  -64.7°  177.3°   E4                                 
E5      -33.3°  156.0°  -43.1°  135.6°   E5                          
H6      -51.6°  125.5°   20.1° -157.4°  -30.6°   H6                   
H7      133.8°  -22.1°  119.5°  -62.2°  161.0°  135.7°   H7            
H8      -28.0°  173.3°  -57.7°  121.5°   17.4°   47.8° -160.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4n0wd_ :   (GLY310)  (PHE411)   [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d4ot8d_ :   (GLY310)  (PHE411)   [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d4otld_ :   (GLY310)  (PHE411)   [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d4ot8b_ :   (GLY310)  (PHE411)   [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d4n0wc_ :   (GLY310)  (PHE411)   [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d4ot8c_ :   (GLY310)  (PHE411)   [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d4n0wb_ :   (GLY310)  (PHE411)   [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d4otla_ :   (GLY310)  (PHE411)   [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d4n0wa_ :   (GLY310)  (PHE411)   [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Burkholderia cenocepacia [TaxId: 216591]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.67