Protein Concepts Dictionary

Tableau information

Concept source:  d3zrcj_  amino acid (a.a.) range (PHE4)(PHE79)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEHEEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (PHE4)   (HIS10) E1
	   (LYS11)   (THR16) E2
	   (THR23)   (LYS36) H3
	   (GLN42)   (LYS46) E4
	   (GLN49)   (ASP53) E5
	   (THR56)   (GLY61) H6
	   (ARG68)   (PRO72) H7
	   (ALA73)   (PHE79) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      156.9°   E2                                               
H3      -55.5°  120.4°   H3                                        
E4      120.1°  -81.5°  125.9°   E4                                 
E5     -105.8°   51.9°  -85.6°  133.4°   E5                          
H6       75.9° -124.4° -104.4°  -44.4°  168.2°   H6                   
H7        5.1°  152.5°  -52.6°  125.1° -101.0°   80.9°   H7            
E8      -34.1°  122.9°  -62.4°  148.4°  -73.3°  105.6°  -30.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ztdg_ :     (PHE4)   (PHE79)   [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Elongin B |Human (Homo sapiens) [TaxId: 9606]
 d3zrcj_ :     (PHE4)   (PHE79)   [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Elongin B |Human (Homo sapiens) [TaxId: 9606]
 d1vcba_ :     (PHE4)   (PHE79)   [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Elongin B |Human (Homo sapiens) [TaxId: 9606]
 d3zrcg_ :     (PHE4)   (PHE79)   [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Elongin B |Human (Homo sapiens) [TaxId: 9606]
 d1lm8b_ :     (PHE4)   (ASP83)   [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Elongin B |Human (Homo sapiens) [TaxId: 9606]
 d1lqba_ :     (PHE4)   (ASP82)   [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Elongin B |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.15