Protein Concepts Dictionary

Tableau information

Concept source:  d3ffna2  amino acid (a.a.) range (ARG161)(GLY248)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEHEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ARG161)  (GLY167) E1
	  (VAL171)  (GLU175) E2
	  (SER179)  (ASN184) H3
	  (ASP187)  (LEU193) E4
	  (ASN196)  (GLY202) E5
	  (ASN206)  (SER226) H6
	  (ALA229)  (GLU235) E7
	  (PRO240)  (GLY248) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      155.4°   E2                                               
H3       10.9°  165.9°   H3                                        
E4      156.0°  -47.2°  146.8°   E4                                 
E5      -40.1°  117.9°  -48.4°  163.7°   E5                          
H6      139.9°  -57.7°  134.4°  -20.8°  166.8°   H6                   
E7      -57.5°  104.2°  -63.7°  144.5°  -20.3°  161.9°   E7            
H8     -105.9°   51.0° -116.7°   91.3°  -79.6°   89.2°  -78.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ffna2 :   (ARG161)  (GLY248)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Human (Homo sapiens) [TaxId: 9606]
 d1j72a2 :   (ASN131)  (LEU223)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Macrophage capping protein Cap G |Human (Homo sapiens) [TaxId: 9606]
 d3fg6a2 :   (ARG511)  (GLY594)   [view usage] : d.109.1.0 |Gelsolin-like |Actin depolymerizing proteins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1p8xb3 :   (ARG641)  (GLY731)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Human (Homo sapiens) [TaxId: 9606]
 d3ffkd3 :   (LEU270)  (GLN364)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Human (Homo sapiens) [TaxId: 9606]
 d1rgig3 :   (LEU270)  (GLN364)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Horse (Equus caballus) [TaxId: 9796]
 d2fgha2 :   (GLU156)  (GLY248)   [view usage] : d.109.1.0 |Gelsolin-like |Actin depolymerizing proteins |automated matches |automated matches |Horse (Equus caballus) [TaxId: 9796]
 d3ffka3 :   (LEU270)  (GLN364)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Human (Homo sapiens) [TaxId: 9606]
 d1kcqa_ :   (ARG161)  (LEU247)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Human (Homo sapiens) [TaxId: 9606]
 d1d0na2 :   (GLU156)  (GLY248)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Horse (Equus caballus) [TaxId: 9796]
 d1jhwa3 :   (ALA249)  (PHE343)   [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Macrophage capping protein Cap G |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.109