Protein Concepts Dictionary

Tableau information

Concept source:  d4c2sa_  amino acid (a.a.) range (ASP205)(PRO321)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP205)  (ASP211) E1
	  (ASP213)  (ASP218) E2
	  (PRO227)  (THR231) E3
	  (HIS233)  (SER239) H4
	  (PHE269)  (SER273) E5
	  (SER273)  (GLY295) H6
	  (ASP302)  (HIS313) H7
	  (THR316)  (PRO321) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      121.6°   E2                                               
E3      -16.2°  105.4°   E3                                        
H4       93.1°   67.4°  -85.3°   H4                                 
E5      166.8°  -71.4°  175.3°  -90.1°   E5                          
H6       42.9°  153.0°  -57.1°   89.4°  124.5°   H6                   
H7     -140.4°  -47.8° -130.0°  -47.5°   45.3°  124.6°   H7            
E8      -32.3°   95.9°  -23.6° -101.5°  158.1°  -74.7° -136.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4c2sa_ :   (ASP205)  (PRO321)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2rj6a_ :   (ASP205)  (PRO321)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |Glycosyltransferase A catalytic domain |Human (Homo sapiens) [TaxId: 9606]
 d2riza_ :   (ASP205)  (PRO321)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |Glycosyltransferase A catalytic domain |Human (Homo sapiens) [TaxId: 9606]
 d2vs4a_ :   (ASP219)  (PRO335)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |alpha-1,3-galactosyltransferase catalytic domain |Cow (Bos taurus) [TaxId: 9913]
 d4gbpa_ :   (ASP205)  (PRO321)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |Glycosyltransferase A catalytic domain |Human (Homo sapiens) [TaxId: 9606]
 d3ioha_ :   (ASP205)  (PRO321)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |Glycosyltransferase A catalytic domain |Human (Homo sapiens) [TaxId: 9606]
 d1fg5n_ :   (PHE139)  (PRO254)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |alpha-1,3-galactosyltransferase catalytic domain |Cow (Bos taurus) [TaxId: 9913]
 d3sxea_ :   (ASP205)  (PRO321)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |Glycosyltransferase A catalytic domain |Human (Homo sapiens) [TaxId: 9606]
 d3v0oa_ :   (ASP205)  (PRO321)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.68