Protein Concepts Dictionary

Tableau information

Concept source:  d1zbia_  amino acid (a.a.) range (SER67)(LYS180)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER67)   (VAL72) E1
	   (ILE80)   (GLY85) E2
	   (LEU94)  (ILE102) E3
	  (THR104)  (ASN124) H4
	  (LYS127)  (SER133) E5
	  (SER133)  (LYS143) H6
	  (LEU157)  (ASN170) H7
	  (GLU175)  (LYS180) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      179.0°   E2                                               
E3      -14.5°  166.1°   E3                                        
H4      150.2°  -30.5°  150.6°   H4                                 
E5      -29.7°  149.7°  -29.0° -179.4°   E5                          
H6      108.7°  -72.3°  100.0°  -54.4°  125.1°   H6                   
H7     -149.6°   31.2° -135.3°   42.2° -137.5°  -50.6°   H7            
E8      -55.8°  123.3°  -60.1°  148.6°  -31.9° -154.7° -131.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1zbia_ :    (SER67)  (LYS180)   [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |automated matches |Bacillus halodurans [TaxId: 272558]
 d1zblb_ :    (SER67)  (THR183)   [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |automated matches |Bacillus halodurans [TaxId: 272558]
 d1zbla1 :    (SER67)  (THR183)   [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |BH0863-like Ribonuclease H |Bacillus halodurans [TaxId: 86665]
 d1zbib_ :    (SER69)  (LYS180)   [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |automated matches |Bacillus halodurans [TaxId: 272558]
 d3ey1a_ :    (SER67)  (THR183)   [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |BH0863-like Ribonuclease H |Bacillus halodurans [TaxId: 86665]
 d4hufb_ :    (SER69)  (LYS180)   [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |BH0863-like Ribonuclease H |Bacillus halodurans [TaxId: 86665]
 d2g8wa_ :    (SER67)  (THR183)   [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |BH0863-like Ribonuclease H |Bacillus halodurans [TaxId: 86665]
 d1zbfa1 :    (SER67)  (LYS180)   [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |BH0863-like Ribonuclease H |Bacillus halodurans [TaxId: 86665]
 d3ulda_ :    (SER69)  (LYS180)   [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |BH0863-like Ribonuclease H |Bacillus halodurans [TaxId: 86665]
 d2g8ha_ :    (SER67)  (LYS180)   [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |BH0863-like Ribonuclease H |Bacillus halodurans [TaxId: 86665]
 d3twha_ :    (SER69)  (LYS180)   [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |BH0863-like Ribonuclease H |Bacillus halodurans [TaxId: 86665]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55