Tableau information
Concept source: d2rf2a3 amino acid (a.a.) range (GLU438)(TRP535)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: EEEHEHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU438) (ASN447) E1
(LYS454) (ASN460) E2
(GLY462) (ASP471) E3
(THR473) (SER489) H4
(VAL493) (ASP498) E5
(SER499) (GLN509) H6
(GLU516) (LYS528) H7
(GLU529) (TRP535) E8
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 157.0° E2
E3 -26.5° 170.1° E3
H4 154.0° -42.0° 141.4° H4
E5 -36.0° 123.4° -55.2° 162.3° E5
H6 128.1° -73.2° 101.6° -55.0° -138.3° H6
H7 177.4° -20.9° 156.0° 26.0° -142.9° -54.5° H7
E8 -50.6° 107.6° -71.4° 146.4° -16.2° -143.4° -127.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1o1wa_ : (THR17) (PRO115) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |HIV RNase H (Domain of reverse transcriptase) |Human immunodeficiency virus type 1 [TaxId: 11676]
d4h4ma2 : (ALA437) (TRP535) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Human immunodeficiency virus type 1 [TaxId: 11678]
d1jlca1 : (GLU438) (TRP535) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |HIV RNase H (Domain of reverse transcriptase) |Human immunodeficiency virus type 1 [TaxId: 11676]
d1s9ga1 : (GLU438) (TRP535) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |HIV RNase H (Domain of reverse transcriptase) |Human immunodeficiency virus type 1 [TaxId: 11676]
d1fkpa1 : (ALA437) (TRP535) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |HIV RNase H (Domain of reverse transcriptase) |Human immunodeficiency virus type 1 [TaxId: 11676]
d1c1ba1 : (ALA437) (TRP535) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |HIV RNase H (Domain of reverse transcriptase) |Human immunodeficiency virus type 1 [TaxId: 11676]
d1jlqa1 : (ALA437) (TRP535) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |HIV RNase H (Domain of reverse transcriptase) |Human immunodeficiency virus type 1 [TaxId: 11676]
d2ehga_ : (ILE2) (TRP115) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d4mfba2 : (ALA437) (TRP535) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Human immunodeficiency virus 1 [TaxId: 11676]
d2iaja2 : (ALA437) (TRP535) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Human immunodeficiency virus type 1 bh10 [TaxId: 11678]
d4pqua2 : (ALA437) (TRP535) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Human immunodeficiency virus type 1 [TaxId: 11678]
d1c0ta1 : (ALA437) (TRP535) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |HIV RNase H (Domain of reverse transcriptase) |Human immunodeficiency virus type 1 [TaxId: 11676]
d1bi4c_ : (GLY59) (PHE139) [view usage] : c.55.3.2 |Ribonuclease H-like motif |Ribonuclease H-like |Retroviral integrase, catalytic domain |Retroviral integrase, catalytic domain |Human immunodeficiency virus type 1 [TaxId: 11676]
d3i0ra2 : (ALA437) (TRP535) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Hiv-1 m:b_hxb2r [TaxId: 11706]
d2jlea2 : (ALA437) (TRP535) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Human immunodeficiency virus 1 [TaxId: 11676]
d1tv6a1 : (ALA437) (TRP535) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |HIV RNase H (Domain of reverse transcriptase) |Human immunodeficiency virus type 1 [TaxId: 11676]
d3dlea2 : (ALA437) (TRP535) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |HIV RNase H (Domain of reverse transcriptase) |Hiv-1 m:b_hxb2r [TaxId: 11706]
d1tkxa1 : (ALA437) (TRP535) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |HIV RNase H (Domain of reverse transcriptase) |Human immunodeficiency virus type 1 [TaxId: 11676]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.55