Protein Concepts Dictionary

Tableau information

Concept source:  d1aupa2  amino acid (a.a.) range (GLU55)(ILE183)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU55)   (ASP66) E1
	   (LYS70)   (GLN80) E2
	   (LEU89)   (ALA95) E3
	   (ASN99)  (THR117) H4
	  (GLY122)  (SER128) E5
	  (SER136)  (ILE155) H6
	  (ILE159)  (GLY164) E7
	  (GLY169)  (ILE183) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      161.7°   E2                                               
E3      -42.6°  149.8°   E3                                        
H4      122.8°  -38.9°  148.9°   H4                                 
E5      -27.2°  169.6°  -20.7°  149.1°   E5                          
H6      148.9°  -39.1°  141.3°  -67.6°  139.8°   H6                   
E7      -50.4°  124.8°  -42.9°  106.0°  -53.0°  160.4°   E7            
H8       96.6°  -86.0°  115.7°  -90.8°   98.9°  -52.5°  147.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1k89a2 :    (GLU55)  (GLY185)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Clostridium symbiosum [TaxId: 1512]
 d3k92f1 :    (GLN46)  (ARG175)   [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d1bw9a2 :    (MET12)  (ASP131)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Phenylalanine dehydrogenase |Rhodococcus sp., M4 [TaxId: 1831]
 d3k8za1 :    (MET46)  (ASP174)   [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d1aupa2 :    (GLU55)  (ILE183)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Clostridium symbiosum [TaxId: 1512]
 d1c1db2 :    (GLU11)  (ASP131)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Phenylalanine dehydrogenase |Rhodococcus sp., M4 [TaxId: 1831]
 d4bhta1 :    (GLU58)  (ASN188)   [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d1leha2 :    (LEU15)  (GLN128)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Leucine dehydrogenase |Bacillus sphaericus [TaxId: 1421]
 d1bw9b2 :   (MET412)  (ASN530)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Phenylalanine dehydrogenase |Rhodococcus sp., M4 [TaxId: 1831]
 d3k92b1 :    (GLN46)  (ARG175)   [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d1bgva2 :    (GLU55)  (GLY185)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Clostridium symbiosum [TaxId: 1512]
 d1v9la2 :    (GLY50)  (LYS164)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Pyrobaculum islandicum [TaxId: 2277]
 d1bvua2 :    (GLN34)  (ARG164)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Thermococcus litoralis [TaxId: 2265]
 d2yfha1 :    (GLU56)  (ILE184)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |automated matches |Clostridium symbiosum [TaxId: 1512]
 d1c1da2 :    (MET12)  (ASP131)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Phenylalanine dehydrogenase |Rhodococcus sp., M4 [TaxId: 1831]
 d3k92e1 :    (GLN46)  (ARG175)   [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d1bxga2 :    (MET12)  (ASP131)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Phenylalanine dehydrogenase |Rhodococcus sp., M4 [TaxId: 1831]
 d3r3ja1 :   (GLU119)  (LEU247)   [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
 d1bxgb2 :   (MET412)  (ASN530)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Phenylalanine dehydrogenase |Rhodococcus sp., M4 [TaxId: 1831]
 d3vpxa1 :    (GLN14)  (THR130)   [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Sporosarcina psychrophila [TaxId: 1476]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.58