Protein Concepts Dictionary

Tableau information

Concept source:  d1a2na_  amino acid (a.a.) range (MET1)(ALA74)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEHEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (MET1)    (GLN7) E1
	    (PRO9)   (GLY14) E2
	   (GLY14)   (GLY20) E3
	   (ALA21)   (ALA35) H4
	   (GLU37)   (ASN43) E5
	   (ASP49)   (GLY61) H6
	   (GLY61)   (ASN67) E7
	   (GLY68)   (ALA74) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2       95.4°   E2                                               
E3     -153.2°  -66.3°   E3                                        
H4      149.3°   54.0°   22.4°   H4                                 
E5      -29.7°  124.6° -163.1° -174.2°   E5                          
H6      154.2°   59.0°   21.8°   -5.2° -172.0°   H6                   
E7       21.9°   98.4°  164.6°  145.2°  -30.3° -147.6°   E7            
E8     -156.6°  -70.6°   -4.5°  -24.6°  160.4°   23.2°  168.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2yvwa_ :    (ASP11)   (ASN83)   [view usage] : d.68.2.0 |IF3-like |EPT/RTPC-like |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
 d3sg1a_ :     (LYS3)   (SER77)   [view usage] : d.68.2.0 |IF3-like |EPT/RTPC-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d1nawa_ :     (MET1)   (ALA74)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) |Enterobacter cloacae [TaxId: 550]
 d1nawa_ :   (ASP211)  (MET284)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) |Enterobacter cloacae [TaxId: 550]
 d1a2na_ :     (MET1)   (ALA74)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) |Escherichia coli [TaxId: 562]
 d1rf4a_ :   (LYS212)  (SER294)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1uaea_ :     (MET1)   (ALA74)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) |Escherichia coli [TaxId: 562]
 d2rl1a_ :     (MET1)   (SER77)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |automated matches |Haemophilus influenzae [TaxId: 727]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.68