Protein Concepts Dictionary

Tableau information

Concept source:  d4d9ta_  amino acid (a.a.) range (ILE428)(GLY534)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEHEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ILE428)  (SER432) E1
	  (TYR433)  (ARG438) E2
	  (PHE448)  (ASP454) E3
	  (THR461)  (GLY471) H4
	  (ILE477)  (GLY486) E5
	  (TYR488)  (GLU494) E6
	  (LEU502)  (GLN508) H7
	  (SER512)  (GLY534) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2     -168.3°   E2                                               
E3      -10.4°  160.9°   E3                                        
H4      144.4°  -40.0° -154.4°   H4                                 
E5      -48.1°  121.3°  -39.7° -146.0°   E5                          
E6      149.7°  -40.5°  158.5°   23.1°  161.7°   E6                   
H7      130.4°  -60.2°  130.1°   64.1°  140.6°  -41.1°   H7            
H8      -43.6°  127.5°  -46.9°  113.4°  -48.8°  135.0° -166.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4d9ta_ :   (ILE428)  (GLY534)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3pixa_ :   (LEU405)  (GLN516)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4f0ib_ :   (LEU515)  (HIS644)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1opjb_ :   (ASP260)  (ASN377)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Abelsone tyrosine kinase (abl) |Mouse (Mus musculus) [TaxId: 10090]
 d4feua_ :    (TRP28)  (ILE134)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Acinetobacter baumannii [TaxId: 509173]
 d2y0aa_ :    (LEU19)  (VAL127)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1wvya_ :    (LEU19)  (GLU118)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4pf4a_ :    (LEU19)  (GLN134)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1koaa2 :  (LEU5948) (ASN6058)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Twitchin, kinase domain |Caenorhabditis elegans, pjk4 [TaxId: 6239]
 d4nm5a_ :    (ILE62)  (GLY176)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3npca_ :    (ILE32)  (GLY146)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4ic7d_ :    (ILE57)  (GLN177)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3npcb_ :    (ILE32)  (GLY146)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1zoha_ :    (VAL45)  (GLY151)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase CK2, alpha subunit |Maize (Zea mays) [TaxId: 4577]
 d1y57a3 :   (LEU273)  (LEU358)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |c-src tyrosine kinase |Human (Homo sapiens) [TaxId: 9606]
 d2vz6b_ :    (LEU19)  (GLY130)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2vn9a_ :    (LEU20)  (GLY131)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4ot5a_ :   (LEU405)  (GLN516)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4d9ua_ :   (ILE428)  (GLY534)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2qr7a_ :   (ILE428)  (GLY534)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1jkta_ :    (LEU19)  (GLN134)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Death-associated protein kinase, Dap |Human (Homo sapiens) [TaxId: 9606]
 d1dawa_ :    (VAL45)  (GLY151)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase CK2, alpha subunit |Maize (Zea mays) [TaxId: 4577]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.144