Protein Concepts Dictionary

Tableau information

Concept source:  d3i07b_  amino acid (a.a.) range (ILE9)(VAL130)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEHEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ILE9)   (THR15) E1
	   (ASN21)   (THR26) E2
	   (LEU30)   (ASN34) E3
	   (PRO50)   (LYS74) H4
	   (LYS78)   (GLY89) E5
	   (GLY95)  (ILE106) E6
	  (GLU111)  (VAL123) H7
	  (CYS124)  (VAL130) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      155.6°   E2                                               
E3      -31.2°  168.7°   E3                                        
H4      169.7°  -28.8°  148.0°   H4                                 
E5      -40.5°  139.1°  -33.5°  148.2°   E5                          
E6      131.4°  -58.1°  127.2°  -38.3°  159.3°   E6                   
H7      -66.1°   93.0°  -86.8°  121.4°  -59.9°  139.9°   H7            
H8      -67.8°  118.2°  -51.2° -120.5°   27.7° -146.1°  -69.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4mh4b_ :    (LEU16)  (ARG137)   [view usage] : d.227.1.0 |OsmC-like |OsmC-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d3lusb_ :     (ILE9)  (VAL130)   [view usage] : d.227.1.0 |OsmC-like |OsmC-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
 d1lqlj_ :  (ILE1807) (GLN1926)   [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Hypothetical protein MPN625 |Mycoplasma pneumoniae [TaxId: 2104]
 d1vlaa_ :     (GLN2)  (LEU124)   [view usage] : d.227.1.2 |OsmC-like |OsmC-like |YhfA-like |Hypothetical protein TM0919 |Thermotoga maritima [TaxId: 2336]
 d1n2fa_ :     (LEU7)  (THR130)   [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Organic hydroperoxide resistance protein Ohr |Pseudomonas aeruginosa, pa01 [TaxId: 287]
 d1lqlc_ :   (THR408)  (GLN526)   [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Hypothetical protein MPN625 |Mycoplasma pneumoniae [TaxId: 2104]
 d4noza_ :     (LEU7)  (THR130)   [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d3i07a_ :     (ILE9)  (VAL130)   [view usage] : d.227.1.0 |OsmC-like |OsmC-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
 d4nozb_ :     (LEU7)  (THR130)   [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d4mh4a_ :    (LEU16)  (THR129)   [view usage] : d.227.1.0 |OsmC-like |OsmC-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d3i07b_ :     (ILE9)  (VAL130)   [view usage] : d.227.1.0 |OsmC-like |OsmC-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
 d3lusa_ :    (THR12)  (VAL123)   [view usage] : d.227.1.0 |OsmC-like |OsmC-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
 d3eera_ :    (SER13)  (VAL130)   [view usage] : d.227.1.0 |OsmC-like |OsmC-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.227