Protein Concepts Dictionary

Tableau information

Concept source:  d3fnkb_  amino acid (a.a.) range (SER68)(GLN168)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEHEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER68)   (GLU74) E1
	   (GLY82)   (VAL88) E2
	   (GLY94)  (TYR102) E3
	  (LEU105)  (SER111) H4
	  (ALA121)  (LYS126) E5
	  (LYS131)  (PHE137) E6
	  (THR150)  (TRP155) E7
	  (GLY163)  (GLN168) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      140.3°   E2                                               
E3      -48.9°  168.7°   E3                                        
H4       19.9° -120.6°   68.7°   H4                                 
E5      122.8°  -34.4°  154.2°  105.6°   E5                          
E6      -76.1°  130.8°  -38.5°  -92.9°  161.1°   E6                   
E7      -54.5°  164.5°   -6.2°  -74.3°  151.8°  -37.8°   E7            
E8      118.6°  -44.6°  143.3°  103.6°  -10.9°  162.1°  140.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3l8qd2 :   (SER231)  (PRO332)   [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellulosomal scaffoldin adaptor protein B, ScaB |Acetivibrio cellulolyticus [TaxId: 35830]
 d3l8qb2 :   (SER231)  (PRO332)   [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellulosomal scaffoldin adaptor protein B, ScaB |Acetivibrio cellulolyticus [TaxId: 35830]
 d3l8qc2 :   (SER231)  (PRO332)   [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellulosomal scaffoldin adaptor protein B, ScaB |Acetivibrio cellulolyticus [TaxId: 35830]
 d3fnkb_ :    (SER68)  (GLN168)   [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellulosomal scaffoldin adaptor protein B, ScaB |Acetivibrio cellulolyticus [TaxId: 35830]
 d3l8qa1 :    (THR62)  (ASN166)   [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellulosomal scaffoldin adaptor protein B, ScaB |Acetivibrio cellulolyticus [TaxId: 35830]
 d3fnkc_ :    (SER68)  (GLN168)   [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellulosomal scaffoldin adaptor protein B, ScaB |Acetivibrio cellulolyticus [TaxId: 35830]
 d3fnka_ :    (SER68)  (PRO169)   [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellulosomal scaffoldin adaptor protein B, ScaB |Acetivibrio cellulolyticus [TaxId: 35830]
 d3l8qc1 :    (THR62)  (ASN166)   [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellulosomal scaffoldin adaptor protein B, ScaB |Acetivibrio cellulolyticus [TaxId: 35830]
 d1qzna_ :    (SER61)  (ASN166)   [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellulosomal scaffoldin adaptor protein B, ScaB |Acetivibrio cellulolyticus [TaxId: 35830]
 d3l8qd1 :    (THR62)  (ASN166)   [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellulosomal scaffoldin adaptor protein B, ScaB |Acetivibrio cellulolyticus [TaxId: 35830]
 d1zv9a_ :    (SER61)  (ASN166)   [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellulosomal scaffoldin adaptor protein B, ScaB |Acetivibrio cellulolyticus [TaxId: 35830]
 d3l8qa2 :   (SER231)  (PRO332)   [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellulosomal scaffoldin adaptor protein B, ScaB |Acetivibrio cellulolyticus [TaxId: 35830]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.2