Protein Concepts Dictionary

Tableau information

Concept source:  d3hmra_  amino acid (a.a.) range (LYS44)(ASN122)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEHEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS44)   (LYS48) E1
	   (LYS48)   (GLU54) E2
	   (LEU58)   (LYS64) E3
	   (ALA68)   (ASN78) H4
	   (LYS86)   (LYS92) E5
	   (LYS95)  (PRO101) E6
	  (GLY108)  (PHE113) E7
	  (GLU116)  (ASN122) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2       93.9°   E2                                               
E3      -82.4° -148.0°   E3                                        
H4      134.5°   41.1°  137.2°   H4                                 
E5      -38.5° -127.7°  -44.2°  165.6°   E5                          
E6      127.7°   44.2°  149.9°  -19.3°  165.7°   E6                   
E7       58.3°  151.6°  -34.1° -167.2°   24.6° -158.6°   E7            
E8      163.9°   71.1°  113.4°  -30.0°  157.5°  -36.5° -137.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1gp9a1 :    (LYS43)  (ASN121)   [view usage] : g.10.1.1 |Hairpin loop containing domain-like |Hairpin loop containing domain-like |Hairpin loop containing domain |Hepatocyte growth factor |Human (Homo sapiens) [TaxId: 9606]
 d4iuaa1 :    (LYS44)  (ASN122)   [view usage] : g.10.1.1 |Hairpin loop containing domain-like |Hairpin loop containing domain-like |Hairpin loop containing domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3hn4a1 :    (LYS43)  (ASN121)   [view usage] : g.10.1.1 |Hairpin loop containing domain-like |Hairpin loop containing domain-like |Hairpin loop containing domain |Hepatocyte growth factor |Human (Homo sapiens) [TaxId: 9606]
 d3hmra_ :    (LYS44)  (ASN122)   [view usage] : g.10.1.1 |Hairpin loop containing domain-like |Hairpin loop containing domain-like |Hairpin loop containing domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1bhta1 :    (LYS43)  (ASN121)   [view usage] : g.10.1.1 |Hairpin loop containing domain-like |Hairpin loop containing domain-like |Hairpin loop containing domain |Hepatocyte growth factor |Human (Homo sapiens) [TaxId: 9606]
 d1nk1a1 :    (LYS43)  (ASN121)   [view usage] : g.10.1.1 |Hairpin loop containing domain-like |Hairpin loop containing domain-like |Hairpin loop containing domain |Hepatocyte growth factor |Human (Homo sapiens) [TaxId: 9606]
 d3mkpd1 :    (LYS43)  (ASN121)   [view usage] : g.10.1.1 |Hairpin loop containing domain-like |Hairpin loop containing domain-like |Hairpin loop containing domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1gmna1 :    (LYS43)  (ASN121)   [view usage] : g.10.1.1 |Hairpin loop containing domain-like |Hairpin loop containing domain-like |Hairpin loop containing domain |Hepatocyte growth factor |Human (Homo sapiens) [TaxId: 9606]
 d1gp9c1 :    (LYS43)  (ASN121)   [view usage] : g.10.1.1 |Hairpin loop containing domain-like |Hairpin loop containing domain-like |Hairpin loop containing domain |Hepatocyte growth factor |Human (Homo sapiens) [TaxId: 9606]
 d1bhtb1 :   (LYS343)  (ASN421)   [view usage] : g.10.1.1 |Hairpin loop containing domain-like |Hairpin loop containing domain-like |Hairpin loop containing domain |Hepatocyte growth factor |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  g.10