Protein Concepts Dictionary

Tableau information

Concept source:  d1d5xb2  amino acid (a.a.) range (ARG4)(GLN92)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ARG4)   (ASN19) E1
	   (GLU22)   (TYR32) E2
	   (TYR37)   (ASP41) E3
	   (GLU46)   (THR51) E4
	   (ARG55)   (GLN64) H5
	   (LEU68)   (ALA74) H6
	   (ALA74)   (GLY86) H7
	   (GLY86)   (GLN92) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      174.0°   E2                                               
E3      -11.9°  168.4°   E3                                        
E4      140.7°  -38.9°  152.4°   E4                                 
H5      -48.4°  132.4°  -36.6°  170.6°   H5                          
H6      -53.2°  130.3°  -60.7°   95.7°  -90.5°   H6                   
H7      -78.1°  107.3°  -80.1°   87.7°   93.4°  -34.8°   H7            
H8      -86.9°   92.8°  -98.4°   54.0° -134.7°  -49.7°  -66.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1d5xb2 :     (ARG4)   (GLN92)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Human (Homo sapiens), HLA-DR4 [TaxId: 9606]
 d1bx2b2 :     (PRO5)   (GLN92)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Human (Homo sapiens), HLA-DR2 [TaxId: 9606]
 d1t7va2 :   (CYS103)  (ARG183)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Zinc-alpha-2-glycoprotein, ZAG |Human (Homo sapiens) [TaxId: 9606]
 d1fv1b2 :     (PRO5)   (GLN92)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Human (Homo sapiens), HLA-DR2 [TaxId: 9606]
 d1h15b2 :     (ARG4)   (GLN92)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Human (Homo sapiens), HLA-DR1 [TaxId: 9606]
 d4fqxd1 :     (PHE3)   (ARG93)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1d6eb2 :     (PRO5)   (GLN92)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Human (Homo sapiens), HLA-DR4 [TaxId: 9606]
 d1s9vb2 :     (VAL8)   (ARG93)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Human (Homo sapiens), HLA-DQ2 [TaxId: 9606]
 d2iang2 :     (ARG4)   (GLN92)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Human (Homo sapiens), HLA-DR1 [TaxId: 9606]
 d1p4la2 :    (SER99)  (ARG181)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class I MHC, alpha-1 and alpha-2 domains |Mouse (Mus musculus), H-2KB [TaxId: 10090]
 d2fseb2 :     (PRO5)   (GLN92)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.19