Tableau information
Concept source: d3q9vb_ amino acid (a.a.) range (GLU124)(ASP204)
nSSEs in this Concept: 8
String of secondary struct.elems. (SSEs) defining this concept: EEEEHEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU124) (GLY129) E1
(ASP130) (ASP134) E2
(ARG138) (TYR142) E3
(GLU145) (SER150) E4
(SER150) (ARG162) H5
(GLY165) (SER169) E6
(SER169) (GLN179) H7
(VAL188) (ASP204) H8
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 165.3° E2
E3 -19.9° 174.0° E3
E4 111.5° -53.8° 130.8° E4
H5 75.3° -109.9° 72.0° 118.9° H5
E6 -108.1° 57.3° -126.8° 5.9° 123.4° E6
H7 -152.8° 34.4° -139.7° -77.4° 124.2° 78.2° H7
H8 -68.5° 125.7° -48.7° 163.2° -77.8° -157.9° 95.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1gxqa_ : (GLU130) (LEU206) [view usage] : a.4.6.1 |DNA/RNA-binding 3-helical bundle |C-terminal effector domain of the bipartite response regulators |PhoB-like |PhoB |Escherichia coli [TaxId: 562]
d1p2fa1 : (GLY121) (ILE195) [view usage] : a.4.6.1 |DNA/RNA-binding 3-helical bundle |C-terminal effector domain of the bipartite response regulators |PhoB-like |Response regulator DrrB |Thermotoga maritima [TaxId: 2336]
d2m87a_ : (ASP4) (GLY82) [view usage] : a.4.6.0 |DNA/RNA-binding 3-helical bundle |C-terminal effector domain of the bipartite response regulators |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 1185418]
d1gxpa_ : (GLU130) (GLU207) [view usage] : a.4.6.1 |DNA/RNA-binding 3-helical bundle |C-terminal effector domain of the bipartite response regulators |PhoB-like |PhoB |Escherichia coli [TaxId: 562]
d2d1va_ : (GLU134) (LYS208) [view usage] : a.4.6.0 |DNA/RNA-binding 3-helical bundle |C-terminal effector domain of the bipartite response regulators |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d3q9vb_ : (GLU124) (ASP204) [view usage] : a.4.6.0 |DNA/RNA-binding 3-helical bundle |C-terminal effector domain of the bipartite response regulators |automated matches |automated matches |Deinococcus radiodurans [TaxId: 1299]
d1qqia_ : (GLU4) (LEU81) [view usage] : a.4.6.1 |DNA/RNA-binding 3-helical bundle |C-terminal effector domain of the bipartite response regulators |PhoB-like |PhoB |Escherichia coli [TaxId: 562]
d1ys6a1 : (GLU135) (GLY215) [view usage] : a.4.6.1 |DNA/RNA-binding 3-helical bundle |C-terminal effector domain of the bipartite response regulators |PhoB-like |Transcriptional regulatory protein PrrA |Mycobacterium tuberculosis [TaxId: 1773]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.4